Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.2■■■□□ 2.26
CCDC146Q8IYE0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC146Q8IYE0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CCDC146Q8IYE0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.2■■■□□ 2.26
CCDC146Q8IYE0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CCDC146Q8IYE0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 OR2I1P-207ENST00000453522 948 ntBASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 AP001330.3-201ENST00000520123 633 ntBASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 AC008764.7-201ENST00000593779 1081 ntBASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CCDC146Q8IYE0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 AF213884.3-201ENST00000563833 479 ntBASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CCDC146Q8IYE0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CCDC146Q8IYE0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 LINC01960-201ENST00000563759 1884 ntBASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 AC087742.1-201ENST00000575880 1738 ntBASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 AC005837.3-201ENST00000612163 286 ntBASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CCDC146Q8IYE0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 SUDS3P1-201ENST00000505831 966 ntBASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CCDC146Q8IYE0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
CCDC146Q8IYE0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
CCDC146Q8IYE0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
CCDC146Q8IYE0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 EDA-201ENST00000338901 1233 ntBASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 AL355001.2-201ENST00000620617 1191 ntBASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CCDC146Q8IYE0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 AC099791.1-201ENST00000416440 715 ntBASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 AL136967.2-201ENST00000623968 743 ntBASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CCDC146Q8IYE0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 MIR939-201ENST00000401314 82 ntBASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 AC133561.4-201ENST00000566112 224 ntBASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CCDC146Q8IYE0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
CCDC146Q8IYE0 BX842568.3-201ENST00000418104 571 ntBASIC29.1■■■□□ 2.25
CCDC146Q8IYE0 AC233992.3-201ENST00000607491 485 ntBASIC29.1■■■□□ 2.25
CCDC146Q8IYE0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CCDC146Q8IYE0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.1■■■□□ 2.25
CCDC146Q8IYE0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms