Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.49■■□□□ 1.99
DDX60Q8IY21 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
DDX60Q8IY21 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.49■■□□□ 1.99
DDX60Q8IY21 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.49■■□□□ 1.99
DDX60Q8IY21 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
DDX60Q8IY21 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.48■■□□□ 1.99
DDX60Q8IY21 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
DDX60Q8IY21 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.48■■□□□ 1.99
DDX60Q8IY21 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
DDX60Q8IY21 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
DDX60Q8IY21 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
DDX60Q8IY21 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
DDX60Q8IY21 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
DDX60Q8IY21 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.47■■□□□ 1.99
DDX60Q8IY21 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.46■■□□□ 1.99
DDX60Q8IY21 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
DDX60Q8IY21 AL353803.4-201ENST00000565882 1934 ntBASIC27.45■■□□□ 1.99
DDX60Q8IY21 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
DDX60Q8IY21 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.99
DDX60Q8IY21 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.45■■□□□ 1.99
DDX60Q8IY21 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DDX60Q8IY21 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
DDX60Q8IY21 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
DDX60Q8IY21 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
DDX60Q8IY21 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 AC068587.7-201ENST00000641602 218 ntBASIC27.44■■□□□ 1.98
DDX60Q8IY21 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 SMUG1P1-201ENST00000590640 811 ntBASIC27.44■■□□□ 1.98
DDX60Q8IY21 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
DDX60Q8IY21 LINC02228-203ENST00000641970 1355 ntBASIC27.44■■□□□ 1.98
DDX60Q8IY21 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX60Q8IY21 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX60Q8IY21 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
DDX60Q8IY21 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.43■■□□□ 1.98
DDX60Q8IY21 NTF6G-201ENST00000591094 616 ntBASIC27.43■■□□□ 1.98
DDX60Q8IY21 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DDX60Q8IY21 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
DDX60Q8IY21 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
DDX60Q8IY21 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 AC087239.1-201ENST00000622671 572 ntBASIC27.42■■□□□ 1.98
DDX60Q8IY21 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
DDX60Q8IY21 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
DDX60Q8IY21 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
DDX60Q8IY21 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
DDX60Q8IY21 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
DDX60Q8IY21 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.41■■□□□ 1.98
DDX60Q8IY21 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.41■■□□□ 1.98
DDX60Q8IY21 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.4■■□□□ 1.98
DDX60Q8IY21 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.4■■□□□ 1.98
DDX60Q8IY21 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
DDX60Q8IY21 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.4■■□□□ 1.98
DDX60Q8IY21 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
DDX60Q8IY21 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.98
DDX60Q8IY21 RAP2CP1-201ENST00000605103 478 ntBASIC27.39■■□□□ 1.98
DDX60Q8IY21 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
DDX60Q8IY21 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
DDX60Q8IY21 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
DDX60Q8IY21 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX60Q8IY21 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.38■■□□□ 1.97
DDX60Q8IY21 AC006015.1-201ENST00000429970 570 ntBASIC27.38■■□□□ 1.97
DDX60Q8IY21 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DDX60Q8IY21 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
DDX60Q8IY21 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DDX60Q8IY21 AC004854.2-201ENST00000608450 1441 ntBASIC27.38■■□□□ 1.97
DDX60Q8IY21 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX60Q8IY21 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX60Q8IY21 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DDX60Q8IY21 AP004607.4-201ENST00000530158 1459 ntBASIC27.38■■□□□ 1.97
DDX60Q8IY21 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.38■■□□□ 1.97
DDX60Q8IY21 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DDX60Q8IY21 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
DDX60Q8IY21 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DDX60Q8IY21 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DDX60Q8IY21 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
DDX60Q8IY21 BX005040.4-201ENST00000637145 1518 ntBASIC27.36■■□□□ 1.97
DDX60Q8IY21 AC016769.1-201ENST00000409132 1010 ntBASIC27.36■■□□□ 1.97
DDX60Q8IY21 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms