Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 GUSBP5-201ENST00000418136 578 ntBASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 AL117332.1-201ENST00000622628 974 ntBASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00346Q8IVM7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 LINC01960-201ENST00000563759 1884 ntBASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC00346Q8IVM7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00346Q8IVM7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00346Q8IVM7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
LINC00346Q8IVM7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00346Q8IVM7 AC139530.1-201ENST00000575312 1977 ntBASIC19.39■□□□□ 0.7
LINC00346Q8IVM7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00346Q8IVM7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LINC00346Q8IVM7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 PKD1P6-201ENST00000343738 4769 ntBASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LINC00346Q8IVM7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms