Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H3AQ71DI3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 AC242852.2-201ENST00000615738 1807 ntBASIC19.27■□□□□ 0.68
HIST2H3AQ71DI3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
HIST2H3AQ71DI3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 AC006455.2-201ENST00000429931 906 ntBASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H3AQ71DI3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 AC099791.2-201ENST00000605725 427 ntBASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST2H3AQ71DI3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 LINC01960-201ENST00000563759 1884 ntBASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST2H3AQ71DI3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 SRD5A1P1-201ENST00000442297 786 ntBASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HIST2H3AQ71DI3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 pRNA.6-201ENST00000610482 90 ntBASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 pRNA.5-201ENST00000612139 90 ntBASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 pRNA.11-201ENST00000618423 90 ntBASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 pRNA.13-201ENST00000619112 90 ntBASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HIST2H3AQ71DI3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST2H3AQ71DI3 AC133637.1-201ENST00000624115 1537 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms