Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIF1Q5T3J3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIF1Q5T3J3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.76■□□□□ 0.91
LRIF1Q5T3J3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.76■□□□□ 0.91
LRIF1Q5T3J3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIF1Q5T3J3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIF1Q5T3J3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 BX664725.1-201ENST00000438252 379 ntBASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRIF1Q5T3J3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 CA15P2-201ENST00000611168 834 ntBASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIF1Q5T3J3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 AC010542.4-201ENST00000563151 1910 ntBASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 AC009102.2-201ENST00000606772 1639 ntBASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRIF1Q5T3J3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LRIF1Q5T3J3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LRIF1Q5T3J3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 AL137060.1-201ENST00000618151 2648 ntBASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIF1Q5T3J3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 AC092028.1-203ENST00000608262 953 ntBASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIF1Q5T3J3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIF1Q5T3J3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms