Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.41■■□□□ 1.34
VARS2Q5ST30 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
VARS2Q5ST30 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.41■■□□□ 1.34
VARS2Q5ST30 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.41■■□□□ 1.34
VARS2Q5ST30 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VARS2Q5ST30 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VARS2Q5ST30 ANOS2P-203ENST00000472227 1816 ntBASIC23.4■■□□□ 1.34
VARS2Q5ST30 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.4■■□□□ 1.34
VARS2Q5ST30 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
VARS2Q5ST30 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VARS2Q5ST30 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.4■■□□□ 1.34
VARS2Q5ST30 TERF1P2-201ENST00000583350 1212 ntBASIC23.4■■□□□ 1.34
VARS2Q5ST30 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VARS2Q5ST30 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VARS2Q5ST30 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
VARS2Q5ST30 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.39■■□□□ 1.34
VARS2Q5ST30 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
VARS2Q5ST30 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.39■■□□□ 1.34
VARS2Q5ST30 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.39■■□□□ 1.34
VARS2Q5ST30 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VARS2Q5ST30 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 KRT18P14-201ENST00000534205 1250 ntBASIC23.39■■□□□ 1.33
VARS2Q5ST30 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
VARS2Q5ST30 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.39■■□□□ 1.33
VARS2Q5ST30 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VARS2Q5ST30 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VARS2Q5ST30 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VARS2Q5ST30 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
VARS2Q5ST30 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VARS2Q5ST30 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VARS2Q5ST30 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.38■■□□□ 1.33
VARS2Q5ST30 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.38■■□□□ 1.33
VARS2Q5ST30 AC022517.1-201ENST00000592429 346 ntBASIC23.38■■□□□ 1.33
VARS2Q5ST30 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.38■■□□□ 1.33
VARS2Q5ST30 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.37■■□□□ 1.33
VARS2Q5ST30 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.37■■□□□ 1.33
VARS2Q5ST30 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
VARS2Q5ST30 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
VARS2Q5ST30 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.37■■□□□ 1.33
VARS2Q5ST30 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VARS2Q5ST30 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.37■■□□□ 1.33
VARS2Q5ST30 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VARS2Q5ST30 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VARS2Q5ST30 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 AC010141.3-201ENST00000456659 717 ntBASIC23.36■■□□□ 1.33
VARS2Q5ST30 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 AC087239.1-201ENST00000622671 572 ntBASIC23.36■■□□□ 1.33
VARS2Q5ST30 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
VARS2Q5ST30 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VARS2Q5ST30 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.36■■□□□ 1.33
VARS2Q5ST30 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VARS2Q5ST30 AC092068.2-201ENST00000590491 1708 ntBASIC23.36■■□□□ 1.33
VARS2Q5ST30 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
VARS2Q5ST30 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.35■■□□□ 1.33
VARS2Q5ST30 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VARS2Q5ST30 IKBKGP1-201ENST00000612193 1073 ntBASIC23.35■■□□□ 1.33
VARS2Q5ST30 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VARS2Q5ST30 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VARS2Q5ST30 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
VARS2Q5ST30 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
VARS2Q5ST30 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VARS2Q5ST30 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VARS2Q5ST30 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
VARS2Q5ST30 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VARS2Q5ST30 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VARS2Q5ST30 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
VARS2Q5ST30 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
VARS2Q5ST30 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms