Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SH2D4BQ5SQS7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4BQ5SQS7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4BQ5SQS7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4BQ5SQS7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4BQ5SQS7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4BQ5SQS7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 AC139530.1-201ENST00000575312 1977 ntBASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4BQ5SQS7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4BQ5SQS7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 AC007375.3-201ENST00000600936 2314 ntBASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 AC144652.1-201ENST00000609974 1624 ntBASIC21.66■■□□□ 1.06
SH2D4BQ5SQS7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 AC080038.3-201ENST00000623346 1952 ntBASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 AC092053.2-201ENST00000640557 1818 ntBASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.65■■□□□ 1.06
SH2D4BQ5SQS7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SH2D4BQ5SQS7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 SNX5-217ENST00000606557 1087 ntBASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH2D4BQ5SQS7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SH2D4BQ5SQS7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 C11orf96-202ENST00000528572 1834 ntBASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4BQ5SQS7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms