Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 FLO9YAL063C 3969 nt3.21□□□□□ -1.9
HRD1Q08109 POL1YNL102W 4407 nt3.21□□□□□ -1.9
HRD1Q08109 FAT1YBR041W 2010 nt3.2□□□□□ -1.9
HRD1Q08109 ZDS2YML109W 2829 nt3.2□□□□□ -1.9
HRD1Q08109 STB3YDR169C 1542 nt3.2□□□□□ -1.9
HRD1Q08109 VPS36YLR417W 1701 nt3.2□□□□□ -1.9
HRD1Q08109 CDC10YCR002C 969 nt3.2□□□□□ -1.9
HRD1Q08109 NOP6YDL213C 678 nt3.2□□□□□ -1.9
HRD1Q08109 AIM7YDR063W 450 nt3.2□□□□□ -1.9
HRD1Q08109 MAG1YER142C 891 nt3.2□□□□□ -1.9
HRD1Q08109 YHR214C-EYHR214C-E 300 nt3.2□□□□□ -1.9
HRD1Q08109 HIS5YIL116W 1158 nt3.2□□□□□ -1.9
HRD1Q08109 YAR070CYAR070C 300 nt3.2□□□□□ -1.9
HRD1Q08109 AVT7YIL088C 1473 nt3.2□□□□□ -1.9
HRD1Q08109 SOF1YLL011W 1470 nt3.2□□□□□ -1.9
HRD1Q08109 APE2YKL157W 2859 nt3.2□□□□□ -1.9
HRD1Q08109 GAC1YOR178C 2382 nt3.19□□□□□ -1.9
HRD1Q08109 SPT6YGR116W 4356 nt3.19□□□□□ -1.9
HRD1Q08109 THI22YPR121W 1719 nt3.19□□□□□ -1.9
HRD1Q08109 KIN4YOR233W 2403 nt3.19□□□□□ -1.9
HRD1Q08109 YHR032C-AYHR032C-A 120 nt3.19□□□□□ -1.9
HRD1Q08109 YKL162C-AYKL162C-A 153 nt3.19□□□□□ -1.9
HRD1Q08109 YBR134WYBR134W 402 nt3.19□□□□□ -1.9
HRD1Q08109 RAD57YDR004W 1383 nt3.19□□□□□ -1.9
HRD1Q08109 YMR111CYMR111C 1389 nt3.19□□□□□ -1.9
HRD1Q08109 APN2YBL019W 1563 nt3.19□□□□□ -1.9
HRD1Q08109 ALA1YOR335C 2877 nt3.19□□□□□ -1.9
HRD1Q08109 BDP1YNL039W 1785 nt3.18□□□□□ -1.9
HRD1Q08109 TCB3YML072C 4638 nt3.18□□□□□ -1.9
HRD1Q08109 SQS1YNL224C 2304 nt3.18□□□□□ -1.9
HRD1Q08109 TMA17YDL110C 453 nt3.18□□□□□ -1.9
HRD1Q08109 AHA1YDR214W 1053 nt3.18□□□□□ -1.9
HRD1Q08109 YER085CYER085C 522 nt3.18□□□□□ -1.9
HRD1Q08109 YFL065CYFL065C 309 nt3.18□□□□□ -1.9
HRD1Q08109 RSM25YIL093C 795 nt3.18□□□□□ -1.9
HRD1Q08109 SWP1YMR149W 861 nt3.18□□□□□ -1.9
HRD1Q08109 YNL181WYNL181W 1224 nt3.18□□□□□ -1.9
HRD1Q08109 PRP22YER013W 3438 nt3.18□□□□□ -1.9
HRD1Q08109 GSC2YGR032W 5688 nt3.18□□□□□ -1.9
HRD1Q08109 YLR352WYLR352W 2424 nt3.18□□□□□ -1.9
HRD1Q08109 GGA1YDR358W 1674 nt3.17□□□□□ -1.9
HRD1Q08109 YOR022CYOR022C 2148 nt3.17□□□□□ -1.9
HRD1Q08109 TSR1YDL060W 2367 nt3.17□□□□□ -1.9
HRD1Q08109 TAF10YDR167W 621 nt3.17□□□□□ -1.9
HRD1Q08109 STE14YDR410C 720 nt3.17□□□□□ -1.9
HRD1Q08109 YGR139WYGR139W 339 nt3.17□□□□□ -1.9
HRD1Q08109 BNA1YJR025C 534 nt3.17□□□□□ -1.9
HRD1Q08109 YJR037WYJR037W 384 nt3.17□□□□□ -1.9
HRD1Q08109 RFA2YNL312W 822 nt3.17□□□□□ -1.9
HRD1Q08109 POC4YPL144W 447 nt3.17□□□□□ -1.9
HRD1Q08109 NAT3YPR131C 588 nt3.17□□□□□ -1.9
HRD1Q08109 YPS7YDR349C 1791 nt3.17□□□□□ -1.9
HRD1Q08109 MEK1YOR351C 1494 nt3.16□□□□□ -1.9
HRD1Q08109 CLB4YLR210W 1383 nt3.16□□□□□ -1.9
HRD1Q08109 ERG5YMR015C 1617 nt3.16□□□□□ -1.9
HRD1Q08109 FUN12YAL035W 3009 nt3.16□□□□□ -1.9
HRD1Q08109 DHH1YDL160C 1521 nt3.16□□□□□ -1.9
HRD1Q08109 SEC53YFL045C 765 nt3.16□□□□□ -1.9
HRD1Q08109 YGR051CYGR051C 324 nt3.16□□□□□ -1.9
HRD1Q08109 GRE3YHR104W 984 nt3.16□□□□□ -1.9
HRD1Q08109 PML1YLR016C 615 nt3.16□□□□□ -1.9
HRD1Q08109 RPN2YIL075C 2838 nt3.16□□□□□ -1.9
HRD1Q08109 RSF2YJR127C 4143 nt3.16□□□□□ -1.9
HRD1Q08109 GCN5YGR252W 1320 nt3.16□□□□□ -1.9
HRD1Q08109 RNR1YER070W 2667 nt3.16□□□□□ -1.9
HRD1Q08109 URA2YJL130C 6645 nt3.15□□□□□ -1.9
HRD1Q08109 YGR027W-BYGR027W-B 5268 nt3.15□□□□□ -1.9
HRD1Q08109 YLR227W-BYLR227W-B 5268 nt3.15□□□□□ -1.9
HRD1Q08109 YPR158C-DYPR158C-D 5268 nt3.15□□□□□ -1.9
HRD1Q08109 NOG1YPL093W 1944 nt3.15□□□□□ -1.9
HRD1Q08109 YMR018WYMR018W 1545 nt3.15□□□□□ -1.9
HRD1Q08109 EAF5YEL018W 840 nt3.15□□□□□ -1.91
HRD1Q08109 YER134CYER134C 537 nt3.15□□□□□ -1.91
HRD1Q08109 COS6YGR295C 1146 nt3.15□□□□□ -1.91
HRD1Q08109 MVD1YNR043W 1191 nt3.15□□□□□ -1.91
HRD1Q08109 FAR8YMR029C 1572 nt3.15□□□□□ -1.91
HRD1Q08109 YKL050CYKL050C 2769 nt3.15□□□□□ -1.91
HRD1Q08109 BAR1YIL015W 1764 nt3.15□□□□□ -1.91
HRD1Q08109 UBP10YNL186W 2379 nt3.15□□□□□ -1.91
HRD1Q08109 PUB1YNL016W 1362 nt3.14□□□□□ -1.91
HRD1Q08109 IRC22YEL001C 678 nt3.14□□□□□ -1.91
HRD1Q08109 MRP13YGR084C 1020 nt3.14□□□□□ -1.91
HRD1Q08109 BNS1YGR230W 414 nt3.14□□□□□ -1.91
HRD1Q08109 PWP2YCR057C 2772 nt3.14□□□□□ -1.91
HRD1Q08109 GLO3YER122C 1482 nt3.14□□□□□ -1.91
HRD1Q08109 HST1YOL068C 1512 nt3.14□□□□□ -1.91
HRD1Q08109 YER039C-AYER039C-A 219 nt3.13□□□□□ -1.91
HRD1Q08109 ECO1YFR027W 846 nt3.13□□□□□ -1.91
HRD1Q08109 YGL074CYGL074C 327 nt3.13□□□□□ -1.91
HRD1Q08109 tL(UAG)JtL(UAG)J 82 nt3.13□□□□□ -1.91
HRD1Q08109 tL(UAG)L1tL(UAG)L1 82 nt3.13□□□□□ -1.91
HRD1Q08109 tL(UAG)L2tL(UAG)L2 82 nt3.13□□□□□ -1.91
HRD1Q08109 YBL010CYBL010C 843 nt3.13□□□□□ -1.91
HRD1Q08109 FOL3YMR113W 1284 nt3.13□□□□□ -1.91
HRD1Q08109 TPP1YMR156C 717 nt3.13□□□□□ -1.91
HRD1Q08109 RNA1YMR235C 1224 nt3.13□□□□□ -1.91
HRD1Q08109 YPL162CYPL162C 822 nt3.13□□□□□ -1.91
HRD1Q08109 SEC6YIL068C 2418 nt3.13□□□□□ -1.91
HRD1Q08109 NAT1YDL040C 2565 nt3.12□□□□□ -1.91
HRD1Q08109 YOL019WYOL019W 1656 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms