Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 AC021242.3-201ENST00000607598 1377 ntBASIC19.69■□□□□ 0.74
SLC3A1Q07837 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 AL353803.4-201ENST00000565882 1934 ntBASIC19.68■□□□□ 0.74
SLC3A1Q07837 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC3A1Q07837 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC3A1Q07837 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC3A1Q07837 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.67■□□□□ 0.74
SLC3A1Q07837 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC3A1Q07837 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC3A1Q07837 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC3A1Q07837 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC3A1Q07837 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC3A1Q07837 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC3A1Q07837 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC3A1Q07837 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC3A1Q07837 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC3A1Q07837 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC3A1Q07837 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC3A1Q07837 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC3A1Q07837 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC3A1Q07837 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC3A1Q07837 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC3A1Q07837 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC3A1Q07837 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC3A1Q07837 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SLC3A1Q07837 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.73
SLC3A1Q07837 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC3A1Q07837 FBXW4P1-201ENST00000426721 2239 ntBASIC19.64■□□□□ 0.73
SLC3A1Q07837 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC3A1Q07837 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC3A1Q07837 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC3A1Q07837 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC3A1Q07837 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC3A1Q07837 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SLC3A1Q07837 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC3A1Q07837 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC3A1Q07837 AC092028.1-203ENST00000608262 953 ntBASIC19.62■□□□□ 0.73
SLC3A1Q07837 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC3A1Q07837 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC3A1Q07837 AL024507.2-201ENST00000606070 2574 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms