Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 GFA1YKL104C 2154 nt4.92□□□□□ -1.62
RKR1Q04781 TLG1YDR468C 675 nt4.91□□□□□ -1.62
RKR1Q04781 CCW14YLR390W-A 717 nt4.91□□□□□ -1.62
RKR1Q04781 YOR331CYOR331C 558 nt4.91□□□□□ -1.62
RKR1Q04781 OXR1YPL196W 822 nt4.91□□□□□ -1.62
RKR1Q04781 VHC1YBR235W 3363 nt4.91□□□□□ -1.62
RKR1Q04781 CLD1YGR110W 1338 nt4.91□□□□□ -1.62
RKR1Q04781 SMC3YJL074C 3693 nt4.91□□□□□ -1.62
RKR1Q04781 HMF1YER057C 390 nt4.91□□□□□ -1.62
RKR1Q04781 YAL004WYAL004W 648 nt4.91□□□□□ -1.62
RKR1Q04781 ATG2YNL242W 4779 nt4.9□□□□□ -1.62
RKR1Q04781 YME2YMR302C 2553 nt4.9□□□□□ -1.62
RKR1Q04781 STR2YJR130C 1920 nt4.9□□□□□ -1.63
RKR1Q04781 PPZ1YML016C 2079 nt4.89□□□□□ -1.63
RKR1Q04781 DPB2YPR175W 2070 nt4.89□□□□□ -1.63
RKR1Q04781 ERG26YGL001C 1050 nt4.89□□□□□ -1.63
RKR1Q04781 RPL18AYOL120C 561 nt4.89□□□□□ -1.63
RKR1Q04781 TPK2YPL203W 1143 nt4.89□□□□□ -1.63
RKR1Q04781 TIP20YGL145W 2106 nt4.89□□□□□ -1.63
RKR1Q04781 SKI6YGR195W 741 nt4.88□□□□□ -1.63
RKR1Q04781 MTR4YJL050W 3222 nt4.88□□□□□ -1.63
RKR1Q04781 SIS2YKR072C 1689 nt4.88□□□□□ -1.63
RKR1Q04781 YMR087WYMR087W 855 nt4.87□□□□□ -1.63
RKR1Q04781 YKL222CYKL222C 2118 nt4.87□□□□□ -1.63
RKR1Q04781 HGH1YGR187C 1185 nt4.87□□□□□ -1.63
RKR1Q04781 YHR069C-AYHR069C-A 363 nt4.87□□□□□ -1.63
RKR1Q04781 RRG9YNL213C 645 nt4.87□□□□□ -1.63
RKR1Q04781 YPL113CYPL113C 1191 nt4.87□□□□□ -1.63
RKR1Q04781 RSE1YML049C 4086 nt4.86□□□□□ -1.63
RKR1Q04781 REC8YPR007C 2043 nt4.86□□□□□ -1.63
RKR1Q04781 SSB1YDL229W 1842 nt4.86□□□□□ -1.63
RKR1Q04781 YKL107WYKL107W 930 nt4.86□□□□□ -1.63
RKR1Q04781 DAN4YJR151C 3486 nt4.86□□□□□ -1.63
RKR1Q04781 VTC4YJL012C 2166 nt4.85□□□□□ -1.63
RKR1Q04781 KCH1YJR054W 1494 nt4.85□□□□□ -1.63
RKR1Q04781 MIG3YER028C 1185 nt4.85□□□□□ -1.63
RKR1Q04781 TOM7YNL070W 183 nt4.85□□□□□ -1.63
RKR1Q04781 EPL1YFL024C 2499 nt4.85□□□□□ -1.63
RKR1Q04781 CIT1YNR001C 1440 nt4.85□□□□□ -1.63
RKR1Q04781 SUP45YBR143C 1314 nt4.85□□□□□ -1.63
RKR1Q04781 TAF1YGR274C 3201 nt4.84□□□□□ -1.63
RKR1Q04781 NMD2YHR077C 3270 nt4.84□□□□□ -1.64
RKR1Q04781 RAD26YJR035W 3258 nt4.83□□□□□ -1.64
RKR1Q04781 CDC40YDR364C 1368 nt4.83□□□□□ -1.64
RKR1Q04781 FAA2YER015W 2235 nt4.83□□□□□ -1.64
RKR1Q04781 ZDS1YMR273C 2748 nt4.83□□□□□ -1.64
RKR1Q04781 NMA111YNL123W 2994 nt4.83□□□□□ -1.64
RKR1Q04781 ARO9YHR137W 1542 nt4.83□□□□□ -1.64
RKR1Q04781 BCH1YMR237W 2175 nt4.83□□□□□ -1.64
RKR1Q04781 SSE2YBR169C 2082 nt4.83□□□□□ -1.64
RKR1Q04781 YDR526CYDR526C 471 nt4.82□□□□□ -1.64
RKR1Q04781 YHR052W-AYHR052W-A 195 nt4.82□□□□□ -1.64
RKR1Q04781 YHR054W-AYHR054W-A 195 nt4.82□□□□□ -1.64
RKR1Q04781 YHR214C-DYHR214C-D 294 nt4.82□□□□□ -1.64
RKR1Q04781 YAR069CYAR069C 294 nt4.82□□□□□ -1.64
RKR1Q04781 SPT6YGR116W 4356 nt4.82□□□□□ -1.64
RKR1Q04781 FRE8YLR047C 2061 nt4.82□□□□□ -1.64
RKR1Q04781 DHR2YKL078W 2208 nt4.82□□□□□ -1.64
RKR1Q04781 YDL176WYDL176W 2127 nt4.82□□□□□ -1.64
RKR1Q04781 YHL049CYHL049C 816 nt4.82□□□□□ -1.64
RKR1Q04781 GAS4YOL132W 1416 nt4.82□□□□□ -1.64
RKR1Q04781 MET7YOR241W 1647 nt4.81□□□□□ -1.64
RKR1Q04781 MOT2YER068W 1764 nt4.81□□□□□ -1.64
RKR1Q04781 YMR135W-AYMR135W-A 534 nt4.81□□□□□ -1.64
RKR1Q04781 NIS1YNL078W 1224 nt4.81□□□□□ -1.64
RKR1Q04781 PNG1YPL096W 1092 nt4.81□□□□□ -1.64
RKR1Q04781 MUP3YHL036W 1641 nt4.81□□□□□ -1.64
RKR1Q04781 GPI18YBR004C 1302 nt4.81□□□□□ -1.64
RKR1Q04781 TRE1YPL176C 2352 nt4.8□□□□□ -1.64
RKR1Q04781 RPL23BYER117W 414 nt4.8□□□□□ -1.64
RKR1Q04781 VEL1YGL258W 621 nt4.8□□□□□ -1.64
RKR1Q04781 RPL36BYPL249C-A 303 nt4.8□□□□□ -1.64
RKR1Q04781 POL31YJR006W 1464 nt4.8□□□□□ -1.64
RKR1Q04781 GUP1YGL084C 1683 nt4.8□□□□□ -1.64
RKR1Q04781 SEC27YGL137W 2670 nt4.8□□□□□ -1.64
RKR1Q04781 YOR022CYOR022C 2148 nt4.8□□□□□ -1.64
RKR1Q04781 HOT1YMR172W 2160 nt4.8□□□□□ -1.64
RKR1Q04781 UGA3YDL170W 1587 nt4.8□□□□□ -1.64
RKR1Q04781 YJR030CYJR030C 2238 nt4.8□□□□□ -1.64
RKR1Q04781 RHO3YIL118W 696 nt4.79□□□□□ -1.64
RKR1Q04781 YOR283WYOR283W 693 nt4.79□□□□□ -1.64
RKR1Q04781 COA2YPL189C-A 207 nt4.79□□□□□ -1.64
RKR1Q04781 GRE1YPL223C 507 nt4.79□□□□□ -1.64
RKR1Q04781 NUP133YKR082W 3474 nt4.79□□□□□ -1.64
RKR1Q04781 CDC14YFR028C 1656 nt4.79□□□□□ -1.64
RKR1Q04781 UBP13YBL067C 2244 nt4.79□□□□□ -1.64
RKR1Q04781 YGR027W-BYGR027W-B 5268 nt4.79□□□□□ -1.64
RKR1Q04781 YLR227W-BYLR227W-B 5268 nt4.79□□□□□ -1.64
RKR1Q04781 YPR158C-DYPR158C-D 5268 nt4.79□□□□□ -1.64
RKR1Q04781 YER084WYER084W 387 nt4.78□□□□□ -1.64
RKR1Q04781 GPI14YJR013W 1212 nt4.78□□□□□ -1.64
RKR1Q04781 YLR339CYLR339C 552 nt4.78□□□□□ -1.64
RKR1Q04781 RPN3YER021W 1572 nt4.78□□□□□ -1.64
RKR1Q04781 PPH3YDR075W 927 nt4.78□□□□□ -1.64
RKR1Q04781 VPS41YDR080W 2979 nt4.77□□□□□ -1.65
RKR1Q04781 HAL5YJL165C 2568 nt4.77□□□□□ -1.65
RKR1Q04781 DOG1YHR044C 741 nt4.77□□□□□ -1.65
RKR1Q04781 DIB1YPR082C 432 nt4.77□□□□□ -1.65
RKR1Q04781 SLD2YKL108W 1362 nt4.77□□□□□ -1.65
RKR1Q04781 YLR257WYLR257W 966 nt4.76□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 29.1 ms