Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 AC144652.1-201ENST00000609974 1624 ntBASIC26.53■■□□□ 1.84
CNTNAP1P78357 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.52■■□□□ 1.84
CNTNAP1P78357 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CNTNAP1P78357 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNTNAP1P78357 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
CNTNAP1P78357 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.52■■□□□ 1.84
CNTNAP1P78357 TPRG1LP1-201ENST00000598702 760 ntBASIC26.52■■□□□ 1.84
CNTNAP1P78357 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNTNAP1P78357 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CNTNAP1P78357 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CNTNAP1P78357 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 AL138781.1-201ENST00000566567 1274 ntBASIC26.51■■□□□ 1.83
CNTNAP1P78357 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
CNTNAP1P78357 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.51■■□□□ 1.83
CNTNAP1P78357 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP1P78357 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CNTNAP1P78357 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CNTNAP1P78357 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CNTNAP1P78357 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.5■■□□□ 1.83
CNTNAP1P78357 KRT19P1-201ENST00000405746 1186 ntBASIC26.5■■□□□ 1.83
CNTNAP1P78357 KRT18P11-201ENST00000435214 1283 ntBASIC26.5■■□□□ 1.83
CNTNAP1P78357 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.5■■□□□ 1.83
CNTNAP1P78357 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.5■■□□□ 1.83
CNTNAP1P78357 AC083906.2-201ENST00000511578 360 ntBASIC26.5■■□□□ 1.83
CNTNAP1P78357 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CNTNAP1P78357 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CNTNAP1P78357 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.49■■□□□ 1.83
CNTNAP1P78357 SLC7A5P2-201ENST00000553010 536 ntBASIC26.49■■□□□ 1.83
CNTNAP1P78357 ITM2C-210ENST00000620962 501 ntBASIC26.49■■□□□ 1.83
CNTNAP1P78357 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CNTNAP1P78357 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CNTNAP1P78357 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.49■■□□□ 1.83
CNTNAP1P78357 AC142381.3-201ENST00000568208 1670 ntBASIC26.49■■□□□ 1.83
CNTNAP1P78357 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.49■■□□□ 1.83
CNTNAP1P78357 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.48■■□□□ 1.83
CNTNAP1P78357 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP1P78357 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.48■■□□□ 1.83
CNTNAP1P78357 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.48■■□□□ 1.83
CNTNAP1P78357 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CNTNAP1P78357 LINC01529-204ENST00000636474 1715 ntBASIC26.48■■□□□ 1.83
CNTNAP1P78357 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP1P78357 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.48■■□□□ 1.83
CNTNAP1P78357 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP1P78357 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP1P78357 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP1P78357 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
CNTNAP1P78357 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP1P78357 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CNTNAP1P78357 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.46■■□□□ 1.83
CNTNAP1P78357 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.46■■□□□ 1.83
CNTNAP1P78357 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.46■■□□□ 1.83
CNTNAP1P78357 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.46■■□□□ 1.83
CNTNAP1P78357 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CNTNAP1P78357 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CNTNAP1P78357 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CNTNAP1P78357 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
CNTNAP1P78357 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CNTNAP1P78357 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CNTNAP1P78357 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CNTNAP1P78357 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP1P78357 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP1P78357 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP1P78357 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.45■■□□□ 1.82
CNTNAP1P78357 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP1P78357 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.45■■□□□ 1.82
CNTNAP1P78357 POU5F1P3-201ENST00000428824 1078 ntBASIC26.45■■□□□ 1.82
CNTNAP1P78357 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.45■■□□□ 1.82
CNTNAP1P78357 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.45■■□□□ 1.82
CNTNAP1P78357 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP1P78357 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CNTNAP1P78357 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CNTNAP1P78357 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.44■■□□□ 1.82
CNTNAP1P78357 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CNTNAP1P78357 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CNTNAP1P78357 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CNTNAP1P78357 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.44■■□□□ 1.82
CNTNAP1P78357 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CNTNAP1P78357 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CNTNAP1P78357 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms