Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH4P55283 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.54■■□□□ 1.2
CDH4P55283 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH4P55283 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.54■■□□□ 1.2
CDH4P55283 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.54■■□□□ 1.2
CDH4P55283 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDH4P55283 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH4P55283 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CDH4P55283 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDH4P55283 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDH4P55283 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH4P55283 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDH4P55283 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH4P55283 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH4P55283 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH4P55283 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH4P55283 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH4P55283 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.53■■□□□ 1.2
CDH4P55283 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.53■■□□□ 1.2
CDH4P55283 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH4P55283 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH4P55283 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH4P55283 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.52■■□□□ 1.2
CDH4P55283 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH4P55283 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.52■■□□□ 1.2
CDH4P55283 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDH4P55283 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDH4P55283 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.52■■□□□ 1.2
CDH4P55283 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH4P55283 IRS3P-201ENST00000223076 1006 ntBASIC22.51■■□□□ 1.19
CDH4P55283 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDH4P55283 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.51■■□□□ 1.19
CDH4P55283 AC087239.1-201ENST00000622671 572 ntBASIC22.51■■□□□ 1.19
CDH4P55283 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH4P55283 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
CDH4P55283 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.51■■□□□ 1.19
CDH4P55283 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH4P55283 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDH4P55283 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH4P55283 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.5■■□□□ 1.19
CDH4P55283 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH4P55283 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CDH4P55283 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
CDH4P55283 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.49■■□□□ 1.19
CDH4P55283 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
CDH4P55283 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH4P55283 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH4P55283 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 AC010141.3-201ENST00000456659 717 ntBASIC22.49■■□□□ 1.19
CDH4P55283 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH4P55283 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH4P55283 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH4P55283 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
CDH4P55283 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.49■■□□□ 1.19
CDH4P55283 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDH4P55283 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH4P55283 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH4P55283 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH4P55283 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDH4P55283 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
CDH4P55283 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.48■■□□□ 1.19
CDH4P55283 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.47■■□□□ 1.19
CDH4P55283 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH4P55283 MIR572-201ENST00000384983 95 ntBASIC22.47■■□□□ 1.19
CDH4P55283 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.47■■□□□ 1.19
CDH4P55283 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.47■■□□□ 1.19
CDH4P55283 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.47■■□□□ 1.19
CDH4P55283 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.47■■□□□ 1.19
CDH4P55283 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.47■■□□□ 1.19
CDH4P55283 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH4P55283 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH4P55283 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDH4P55283 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
CDH4P55283 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDH4P55283 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.46■■□□□ 1.19
CDH4P55283 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDH4P55283 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.46■■□□□ 1.19
CDH4P55283 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDH4P55283 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDH4P55283 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDH4P55283 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
CDH4P55283 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDH4P55283 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDH4P55283 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.45■■□□□ 1.18
CDH4P55283 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.45■■□□□ 1.18
CDH4P55283 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDH4P55283 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CDH4P55283 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDH4P55283 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms