Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
NEK4P51957 AC010997.5-201ENST00000609182 354 ntBASIC26.2■■□□□ 1.78
NEK4P51957 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.2■■□□□ 1.78
NEK4P51957 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NEK4P51957 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
NEK4P51957 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
NEK4P51957 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK4P51957 LINC01960-201ENST00000563759 1884 ntBASIC26.19■■□□□ 1.78
NEK4P51957 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
NEK4P51957 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.19■■□□□ 1.78
NEK4P51957 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK4P51957 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.19■■□□□ 1.78
NEK4P51957 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NEK4P51957 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK4P51957 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NEK4P51957 AC007375.3-201ENST00000600936 2314 ntBASIC26.19■■□□□ 1.78
NEK4P51957 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
NEK4P51957 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
NEK4P51957 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.18■■□□□ 1.78
NEK4P51957 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
NEK4P51957 TSPY9P-201ENST00000440215 945 ntBASIC26.18■■□□□ 1.78
NEK4P51957 TSPY11P-201ENST00000442607 1045 ntBASIC26.18■■□□□ 1.78
NEK4P51957 AC009299.2-201ENST00000482477 511 ntBASIC26.18■■□□□ 1.78
NEK4P51957 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.18■■□□□ 1.78
NEK4P51957 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NEK4P51957 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK4P51957 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEK4P51957 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NEK4P51957 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.17■■□□□ 1.78
NEK4P51957 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.17■■□□□ 1.78
NEK4P51957 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NEK4P51957 AC004687.1-201ENST00000579003 1625 ntBASIC26.17■■□□□ 1.78
NEK4P51957 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC26.17■■□□□ 1.78
NEK4P51957 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEK4P51957 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NEK4P51957 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NEK4P51957 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.16■■□□□ 1.78
NEK4P51957 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NEK4P51957 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK4P51957 C17orf82-201ENST00000623772 1530 ntBASIC26.15■■□□□ 1.78
NEK4P51957 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK4P51957 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK4P51957 AL451085.2-201ENST00000605085 799 ntBASIC26.15■■□□□ 1.78
NEK4P51957 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK4P51957 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.15■■□□□ 1.78
NEK4P51957 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NEK4P51957 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NEK4P51957 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEK4P51957 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.14■■□□□ 1.78
NEK4P51957 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NEK4P51957 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NEK4P51957 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEK4P51957 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.13■■□□□ 1.77
NEK4P51957 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEK4P51957 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.13■■□□□ 1.77
NEK4P51957 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.13■■□□□ 1.77
NEK4P51957 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NEK4P51957 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
NEK4P51957 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
NEK4P51957 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.12■■□□□ 1.77
NEK4P51957 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.12■■□□□ 1.77
NEK4P51957 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NEK4P51957 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
NEK4P51957 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK4P51957 FBXW4P1-201ENST00000426721 2239 ntBASIC26.11■■□□□ 1.77
NEK4P51957 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK4P51957 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK4P51957 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NEK4P51957 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.11■■□□□ 1.77
NEK4P51957 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
NEK4P51957 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NEK4P51957 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NEK4P51957 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.1■■□□□ 1.77
NEK4P51957 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NEK4P51957 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NEK4P51957 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NEK4P51957 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK4P51957 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.09■■□□□ 1.77
NEK4P51957 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.09■■□□□ 1.77
NEK4P51957 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.09■■□□□ 1.77
NEK4P51957 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK4P51957 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NEK4P51957 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NEK4P51957 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms