Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.31■□□□□ 0.68
HCFC1P51610 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.31■□□□□ 0.68
HCFC1P51610 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.31■□□□□ 0.68
HCFC1P51610 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HCFC1P51610 AC004854.2-201ENST00000608450 1441 ntBASIC19.31■□□□□ 0.68
HCFC1P51610 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.31■□□□□ 0.68
HCFC1P51610 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HCFC1P51610 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.3■□□□□ 0.68
HCFC1P51610 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1P51610 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.3■□□□□ 0.68
HCFC1P51610 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1P51610 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1P51610 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HCFC1P51610 KRT19P1-201ENST00000405746 1186 ntBASIC19.3■□□□□ 0.68
HCFC1P51610 AC104771.1-201ENST00000603335 964 ntBASIC19.3■□□□□ 0.68
HCFC1P51610 AC080038.1-201ENST00000611274 1154 ntBASIC19.3■□□□□ 0.68
HCFC1P51610 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1P51610 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HCFC1P51610 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 AC079630.1-202ENST00000618127 1840 ntBASIC19.29■□□□□ 0.68
HCFC1P51610 MIR663A-201ENST00000385250 93 ntBASIC19.29■□□□□ 0.68
HCFC1P51610 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.29■□□□□ 0.68
HCFC1P51610 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.29■□□□□ 0.68
HCFC1P51610 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HCFC1P51610 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.29■□□□□ 0.68
HCFC1P51610 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC1P51610 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HCFC1P51610 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HCFC1P51610 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.28■□□□□ 0.68
HCFC1P51610 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.28■□□□□ 0.68
HCFC1P51610 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC1P51610 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HCFC1P51610 LINC01529-204ENST00000636474 1715 ntBASIC19.28■□□□□ 0.68
HCFC1P51610 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1P51610 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HCFC1P51610 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HCFC1P51610 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1P51610 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1P51610 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 LINC02228-203ENST00000641970 1355 ntBASIC19.27■□□□□ 0.68
HCFC1P51610 BX005040.4-201ENST00000637145 1518 ntBASIC19.27■□□□□ 0.68
HCFC1P51610 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1P51610 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC1P51610 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC1P51610 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.27■□□□□ 0.67
HCFC1P51610 AC142381.3-201ENST00000568208 1670 ntBASIC19.27■□□□□ 0.67
HCFC1P51610 AC087239.1-201ENST00000622671 572 ntBASIC19.27■□□□□ 0.67
HCFC1P51610 ABHD17AP1-201ENST00000358206 933 ntBASIC19.26■□□□□ 0.67
HCFC1P51610 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.26■□□□□ 0.67
HCFC1P51610 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HCFC1P51610 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1P51610 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HCFC1P51610 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1P51610 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 CROCCP5-201ENST00000436658 830 ntBASIC19.25■□□□□ 0.67
HCFC1P51610 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1P51610 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.25■□□□□ 0.67
HCFC1P51610 BID-214ENST00000617586 542 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1P51610 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1P51610 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HCFC1P51610 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
HCFC1P51610 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms