Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LHX2P50458 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.71■□□□□ 0.75
LHX2P50458 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
LHX2P50458 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX2P50458 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX2P50458 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX2P50458 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.71■□□□□ 0.75
LHX2P50458 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.71■□□□□ 0.75
LHX2P50458 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.71■□□□□ 0.75
LHX2P50458 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.71■□□□□ 0.75
LHX2P50458 AL358852.1-201ENST00000623174 1268 ntBASIC19.71■□□□□ 0.75
LHX2P50458 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LHX2P50458 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX2P50458 AC097381.1-201ENST00000429019 1296 ntBASIC19.7■□□□□ 0.74
LHX2P50458 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX2P50458 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX2P50458 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
LHX2P50458 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX2P50458 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LHX2P50458 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.7■□□□□ 0.74
LHX2P50458 MIR6821-201ENST00000617625 74 ntBASIC19.7■□□□□ 0.74
LHX2P50458 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.7■□□□□ 0.74
LHX2P50458 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LHX2P50458 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.7■□□□□ 0.74
LHX2P50458 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LHX2P50458 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX2P50458 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX2P50458 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LHX2P50458 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX2P50458 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX2P50458 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX2P50458 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LHX2P50458 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.69■□□□□ 0.74
LHX2P50458 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.69■□□□□ 0.74
LHX2P50458 AC012414.1-201ENST00000556676 535 ntBASIC19.69■□□□□ 0.74
LHX2P50458 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX2P50458 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX2P50458 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LHX2P50458 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
LHX2P50458 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LHX2P50458 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.69■□□□□ 0.74
LHX2P50458 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX2P50458 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LHX2P50458 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.68■□□□□ 0.74
LHX2P50458 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 AC010141.3-201ENST00000456659 717 ntBASIC19.68■□□□□ 0.74
LHX2P50458 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.68■□□□□ 0.74
LHX2P50458 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 AL354811.1-201ENST00000610286 706 ntBASIC19.68■□□□□ 0.74
LHX2P50458 AC087239.1-201ENST00000622671 572 ntBASIC19.68■□□□□ 0.74
LHX2P50458 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.68■□□□□ 0.74
LHX2P50458 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.68■□□□□ 0.74
LHX2P50458 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LHX2P50458 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LHX2P50458 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
LHX2P50458 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.67■□□□□ 0.74
LHX2P50458 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LHX2P50458 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LHX2P50458 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LHX2P50458 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
LHX2P50458 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LHX2P50458 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
LHX2P50458 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.66■□□□□ 0.74
LHX2P50458 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.66■□□□□ 0.74
LHX2P50458 MIR6084-201ENST00000622012 110 ntBASIC19.66■□□□□ 0.74
LHX2P50458 AC105233.4-201ENST00000642045 216 ntBASIC19.66■□□□□ 0.74
LHX2P50458 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.66■□□□□ 0.74
LHX2P50458 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LHX2P50458 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX2P50458 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LHX2P50458 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms