Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
SRP9P49458 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SRP9P49458 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRP9P49458 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP9P49458 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRP9P49458 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRP9P49458 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.39■□□□□ 0.69
SRP9P49458 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SRP9P49458 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SRP9P49458 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SRP9P49458 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SRP9P49458 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRP9P49458 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SRP9P49458 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP9P49458 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP9P49458 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRP9P49458 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRP9P49458 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.38■□□□□ 0.69
SRP9P49458 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SRP9P49458 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRP9P49458 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SRP9P49458 AC005703.6-201ENST00000623265 1329 ntBASIC19.38■□□□□ 0.69
SRP9P49458 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.37■□□□□ 0.69
SRP9P49458 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 ALDH1A3-203ENST00000557963 1670 ntBASIC19.37■□□□□ 0.69
SRP9P49458 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.37■□□□□ 0.69
SRP9P49458 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.37■□□□□ 0.69
SRP9P49458 MIR6724-1-201ENST00000616420 92 ntBASIC19.37■□□□□ 0.69
SRP9P49458 MIR6724-2-201ENST00000616483 92 ntBASIC19.37■□□□□ 0.69
SRP9P49458 MIR6724-4-201ENST00000617390 92 ntBASIC19.37■□□□□ 0.69
SRP9P49458 MIR6724-3-201ENST00000622482 92 ntBASIC19.37■□□□□ 0.69
SRP9P49458 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRP9P49458 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SRP9P49458 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.36■□□□□ 0.69
SRP9P49458 AL356441.2-201ENST00000443009 864 ntBASIC19.36■□□□□ 0.69
SRP9P49458 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.36■□□□□ 0.69
SRP9P49458 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SRP9P49458 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
SRP9P49458 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SRP9P49458 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRP9P49458 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SRP9P49458 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.35■□□□□ 0.69
SRP9P49458 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.35■□□□□ 0.69
SRP9P49458 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 ESRRAP2-201ENST00000418437 1549 ntBASIC19.35■□□□□ 0.69
SRP9P49458 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRP9P49458 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SRP9P49458 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.34■□□□□ 0.69
SRP9P49458 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.34■□□□□ 0.69
SRP9P49458 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.34■□□□□ 0.69
SRP9P49458 FBXW4P1-201ENST00000426721 2239 ntBASIC19.34■□□□□ 0.69
SRP9P49458 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.34■□□□□ 0.69
SRP9P49458 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.34■□□□□ 0.69
SRP9P49458 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SRP9P49458 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRP9P49458 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms