Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 PRP9YDL030W 1593 nt2.69□□□□□ -1.98
TRA1P38811 RPB9YGL070C 369 nt2.69□□□□□ -1.98
TRA1P38811 CDC40YDR364C 1368 nt2.69□□□□□ -1.98
TRA1P38811 SIR1YKR101W 1965 nt2.68□□□□□ -1.98
TRA1P38811 SSA2YLL024C 1920 nt2.68□□□□□ -1.98
TRA1P38811 GUS1YGL245W 2127 nt2.68□□□□□ -1.98
TRA1P38811 ATG11YPR049C 3537 nt2.68□□□□□ -1.98
TRA1P38811 YPL260WYPL260W 1656 nt2.68□□□□□ -1.98
TRA1P38811 PRS5YOL061W 1491 nt2.68□□□□□ -1.98
TRA1P38811 DGK1YOR311C 873 nt2.68□□□□□ -1.98
TRA1P38811 ROG1YGL144C 2058 nt2.68□□□□□ -1.98
TRA1P38811 PAN5YHR063C 1140 nt2.68□□□□□ -1.98
TRA1P38811 ASI1YMR119W 1875 nt2.68□□□□□ -1.98
TRA1P38811 RPL23BYER117W 414 nt2.68□□□□□ -1.98
TRA1P38811 REE1YJL217W 597 nt2.68□□□□□ -1.98
TRA1P38811 NCE103YNL036W 666 nt2.68□□□□□ -1.98
TRA1P38811 YRA2YKL214C 612 nt2.67□□□□□ -1.98
TRA1P38811 RPS21AYKR057W 264 nt2.67□□□□□ -1.98
TRA1P38811 AVT7YIL088C 1473 nt2.67□□□□□ -1.98
TRA1P38811 YGL074CYGL074C 327 nt2.67□□□□□ -1.98
TRA1P38811 REC104YHR157W 549 nt2.67□□□□□ -1.98
TRA1P38811 PIR1YKL164C 1026 nt2.67□□□□□ -1.98
TRA1P38811 MCK1YNL307C 1128 nt2.67□□□□□ -1.98
TRA1P38811 RIB5YBR256C 717 nt2.67□□□□□ -1.98
TRA1P38811 RAD53YPL153C 2466 nt2.67□□□□□ -1.98
TRA1P38811 YPT7YML001W 627 nt2.66□□□□□ -1.98
TRA1P38811 GEM1YAL048C 1989 nt2.66□□□□□ -1.98
TRA1P38811 RNT1YMR239C 1416 nt2.66□□□□□ -1.98
TRA1P38811 IRC18YJL037W 675 nt2.66□□□□□ -1.98
TRA1P38811 CHS3YBR023C 3498 nt2.66□□□□□ -1.98
TRA1P38811 ALT2YDR111C 1524 nt2.66□□□□□ -1.98
TRA1P38811 PRP43YGL120C 2304 nt2.66□□□□□ -1.98
TRA1P38811 CLB3YDL155W 1284 nt2.66□□□□□ -1.98
TRA1P38811 RSM24YDR175C 960 nt2.66□□□□□ -1.98
TRA1P38811 PHO86YJL117W 936 nt2.66□□□□□ -1.98
TRA1P38811 YLR339CYLR339C 552 nt2.66□□□□□ -1.98
TRA1P38811 MSN1YOL116W 1149 nt2.65□□□□□ -1.99
TRA1P38811 FYV5YCL058C 459 nt2.65□□□□□ -1.99
TRA1P38811 TED1YIL039W 1422 nt2.65□□□□□ -1.99
TRA1P38811 NCS2YNL119W 1482 nt2.65□□□□□ -1.99
TRA1P38811 DEG1YFL001W 1329 nt2.64□□□□□ -1.99
TRA1P38811 STE23YLR389C 3084 nt2.64□□□□□ -1.99
TRA1P38811 VAC7YNL054W 3498 nt2.64□□□□□ -1.99
TRA1P38811 ESF1YDR365C 1887 nt2.64□□□□□ -1.99
TRA1P38811 YAL031W-AYAL031W-A 309 nt2.64□□□□□ -1.99
TRA1P38811 FMP25YLR077W 1752 nt2.64□□□□□ -1.99
TRA1P38811 LEU1YGL009C 2340 nt2.64□□□□□ -1.99
TRA1P38811 DCS1YLR270W 1053 nt2.64□□□□□ -1.99
TRA1P38811 NIS1YNL078W 1224 nt2.64□□□□□ -1.99
TRA1P38811 MRPL11YDL202W 750 nt2.63□□□□□ -1.99
TRA1P38811 MDM12YOL009C 816 nt2.63□□□□□ -1.99
TRA1P38811 MCM5YLR274W 2328 nt2.63□□□□□ -1.99
TRA1P38811 SEA4YBL104C 3117 nt2.63□□□□□ -1.99
TRA1P38811 MCX1YBR227C 1563 nt2.63□□□□□ -1.99
TRA1P38811 RSA1YPL193W 1146 nt2.63□□□□□ -1.99
TRA1P38811 MET10YFR030W 3108 nt2.63□□□□□ -1.99
TRA1P38811 RNR2YJL026W 1200 nt2.62□□□□□ -1.99
TRA1P38811 NIT3YLR351C 876 nt2.62□□□□□ -1.99
TRA1P38811 YBL039W-BYBL039W-B 180 nt2.62□□□□□ -1.99
TRA1P38811 ABD1YBR236C 1311 nt2.62□□□□□ -1.99
TRA1P38811 HBT1YDL223C 3141 nt2.62□□□□□ -1.99
TRA1P38811 MIS1YBR084W 2928 nt2.62□□□□□ -1.99
TRA1P38811 MRPS35YGR165W 1038 nt2.62□□□□□ -1.99
TRA1P38811 SHE1YBL031W 1017 nt2.62□□□□□ -1.99
TRA1P38811 GRE1YPL223C 507 nt2.62□□□□□ -1.99
TRA1P38811 TLC1TLC1 1301 nt2.61□□□□□ -1.99
TRA1P38811 GAT2YMR136W 1683 nt2.61□□□□□ -1.99
TRA1P38811 YOR022CYOR022C 2148 nt2.61□□□□□ -1.99
TRA1P38811 SKI6YGR195W 741 nt2.61□□□□□ -1.99
TRA1P38811 HEH2YDR458C 1992 nt2.61□□□□□ -1.99
TRA1P38811 OM14YBR230C 405 nt2.6□□□□□ -1.99
TRA1P38811 YDL180WYDL180W 1644 nt2.6□□□□□ -1.99
TRA1P38811 DPB2YPR175W 2070 nt2.6□□□□□ -1.99
TRA1P38811 OSW7YFR039C 1533 nt2.6□□□□□ -1.99
TRA1P38811 NRM1YNR009W 750 nt2.6□□□□□ -1.99
TRA1P38811 DHR2YKL078W 2208 nt2.6□□□□□ -1.99
TRA1P38811 YIL102C-AYIL102C-A 228 nt2.59□□□□□ -1.99
TRA1P38811 YAL004WYAL004W 648 nt2.59□□□□□ -1.99
TRA1P38811 YNL320WYNL320W 855 nt2.59□□□□□ -1.99
TRA1P38811 AUR1YKL004W 1206 nt2.59□□□□□ -1.99
TRA1P38811 YDR186CYDR186C 2634 nt2.59□□□□□ -1.99
TRA1P38811 YDR306CYDR306C 1437 nt2.59□□□□□ -2
TRA1P38811 POG1YIL122W 1056 nt2.59□□□□□ -2
TRA1P38811 YBR298C-AYBR298C-A 222 nt2.59□□□□□ -2
TRA1P38811 SNF3YDL194W 2655 nt2.59□□□□□ -2
TRA1P38811 ILS1YBL076C 3219 nt2.59□□□□□ -2
TRA1P38811 NGL2YMR285C 1548 nt2.59□□□□□ -2
TRA1P38811 INO80YGL150C 4470 nt2.59□□□□□ -2
TRA1P38811 RPA135YPR010C 3612 nt2.58□□□□□ -2
TRA1P38811 REC8YPR007C 2043 nt2.58□□□□□ -2
TRA1P38811 PRX1YBL064C 786 nt2.58□□□□□ -2
TRA1P38811 BMS1YPL217C 3552 nt2.58□□□□□ -2
TRA1P38811 BUB1YGR188C 3066 nt2.58□□□□□ -2
TRA1P38811 SWP82YFL049W 1872 nt2.58□□□□□ -2
TRA1P38811 YPS6YIR039C 1614 nt2.58□□□□□ -2
TRA1P38811 BUD5YCR038C 1929 nt2.58□□□□□ -2
TRA1P38811 YDL176WYDL176W 2127 nt2.58□□□□□ -2
TRA1P38811 NOP2YNL061W 1857 nt2.57□□□□□ -2
TRA1P38811 ARO10YDR380W 1908 nt2.57□□□□□ -2
TRA1P38811 TYR1YBR166C 1359 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms