Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TNFSF4P23510 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TNFSF4P23510 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 DUSP8P5-201ENST00000422884 1815 ntBASIC18.74■□□□□ 0.59
TNFSF4P23510 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
TNFSF4P23510 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFSF4P23510 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF4P23510 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TNFSF4P23510 AC008764.7-201ENST00000593779 1081 ntBASIC18.74■□□□□ 0.59
TNFSF4P23510 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFSF4P23510 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFSF4P23510 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TNFSF4P23510 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TNFSF4P23510 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF4P23510 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 AC091305.1-201ENST00000479476 895 ntBASIC18.73■□□□□ 0.59
TNFSF4P23510 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFSF4P23510 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF4P23510 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TNFSF4P23510 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF4P23510 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFSF4P23510 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFSF4P23510 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TNFSF4P23510 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TNFSF4P23510 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 AP001330.3-201ENST00000520123 633 ntBASIC18.72■□□□□ 0.59
TNFSF4P23510 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 AF213884.3-201ENST00000563833 479 ntBASIC18.72■□□□□ 0.59
TNFSF4P23510 AC126544.1-201ENST00000580842 1059 ntBASIC18.72■□□□□ 0.59
TNFSF4P23510 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 AC068587.7-201ENST00000641602 218 ntBASIC18.72■□□□□ 0.59
TNFSF4P23510 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFSF4P23510 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFSF4P23510 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TNFSF4P23510 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.72■□□□□ 0.59
TNFSF4P23510 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF4P23510 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TNFSF4P23510 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TNFSF4P23510 RASA4CP-201ENST00000424092 1398 ntBASIC18.71■□□□□ 0.59
TNFSF4P23510 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 SLC47A1P1-202ENST00000449666 945 ntBASIC18.71■□□□□ 0.59
TNFSF4P23510 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFSF4P23510 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 AC087239.1-201ENST00000622671 572 ntBASIC18.71■□□□□ 0.59
TNFSF4P23510 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TNFSF4P23510 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF4P23510 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TNFSF4P23510 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 MIR939-201ENST00000401314 82 ntBASIC18.7■□□□□ 0.58
TNFSF4P23510 AC099791.1-201ENST00000416440 715 ntBASIC18.7■□□□□ 0.58
TNFSF4P23510 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF4P23510 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF4P23510 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFSF4P23510 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TNFSF4P23510 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.7■□□□□ 0.58
TNFSF4P23510 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFSF4P23510 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF4P23510 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF4P23510 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF4P23510 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF4P23510 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.69■□□□□ 0.58
TNFSF4P23510 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF4P23510 SUDS3P1-201ENST00000505831 966 ntBASIC18.69■□□□□ 0.58
TNFSF4P23510 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFSF4P23510 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFSF4P23510 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TNFSF4P23510 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms