Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRM3P20309 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRM3P20309 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.82■■□□□ 1.08
CHRM3P20309 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.82■■□□□ 1.08
CHRM3P20309 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.82■■□□□ 1.08
CHRM3P20309 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CHRM3P20309 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHRM3P20309 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CHRM3P20309 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRM3P20309 ESRRAP2-201ENST00000418437 1549 ntBASIC21.81■■□□□ 1.08
CHRM3P20309 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRM3P20309 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRM3P20309 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRM3P20309 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRM3P20309 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHRM3P20309 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRM3P20309 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRM3P20309 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRM3P20309 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CHRM3P20309 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.8■■□□□ 1.08
CHRM3P20309 AC006455.2-201ENST00000429931 906 ntBASIC21.8■■□□□ 1.08
CHRM3P20309 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRM3P20309 AL499627.2-201ENST00000606283 725 ntBASIC21.8■■□□□ 1.08
CHRM3P20309 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRM3P20309 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRM3P20309 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CHRM3P20309 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CHRM3P20309 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRM3P20309 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRM3P20309 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRM3P20309 pRNA.6-201ENST00000610482 90 ntBASIC21.79■■□□□ 1.08
CHRM3P20309 pRNA.5-201ENST00000612139 90 ntBASIC21.79■■□□□ 1.08
CHRM3P20309 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 pRNA.11-201ENST00000618423 90 ntBASIC21.79■■□□□ 1.08
CHRM3P20309 pRNA.13-201ENST00000619112 90 ntBASIC21.79■■□□□ 1.08
CHRM3P20309 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRM3P20309 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.79■■□□□ 1.08
CHRM3P20309 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHRM3P20309 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRM3P20309 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRM3P20309 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CHRM3P20309 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHRM3P20309 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 MIR4466-201ENST00000606121 54 ntBASIC21.78■■□□□ 1.08
CHRM3P20309 AC092171.4-201ENST00000609130 632 ntBASIC21.78■■□□□ 1.08
CHRM3P20309 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRM3P20309 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.78■■□□□ 1.08
CHRM3P20309 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRM3P20309 GUSBP5-202ENST00000510805 1989 ntBASIC21.78■■□□□ 1.08
CHRM3P20309 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRM3P20309 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRM3P20309 AC131212.1-201ENST00000613771 668 ntBASIC21.77■■□□□ 1.08
CHRM3P20309 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.77■■□□□ 1.08
CHRM3P20309 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHRM3P20309 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
CHRM3P20309 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHRM3P20309 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms