Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 AC239859.2-201ENST00000444165 318 ntBASIC19.73■□□□□ 0.75
HIST1H1CP16403 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H1CP16403 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H1CP16403 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HIST1H1CP16403 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H1CP16403 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H1CP16403 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.73■□□□□ 0.75
HIST1H1CP16403 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1CP16403 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1CP16403 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.72■□□□□ 0.75
HIST1H1CP16403 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H1CP16403 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1CP16403 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1CP16403 AC010997.5-201ENST00000609182 354 ntBASIC19.71■□□□□ 0.75
HIST1H1CP16403 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1CP16403 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H1CP16403 AC004687.1-201ENST00000579003 1625 ntBASIC19.71■□□□□ 0.75
HIST1H1CP16403 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H1CP16403 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 AC007375.3-201ENST00000600936 2314 ntBASIC19.7■□□□□ 0.74
HIST1H1CP16403 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST1H1CP16403 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HIST1H1CP16403 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H1CP16403 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H1CP16403 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HIST1H1CP16403 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST1H1CP16403 TSPY9P-201ENST00000440215 945 ntBASIC19.69■□□□□ 0.74
HIST1H1CP16403 TSPY11P-201ENST00000442607 1045 ntBASIC19.69■□□□□ 0.74
HIST1H1CP16403 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H1CP16403 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST1H1CP16403 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 C17orf82-201ENST00000623772 1530 ntBASIC19.68■□□□□ 0.74
HIST1H1CP16403 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 AC009299.2-201ENST00000482477 511 ntBASIC19.68■□□□□ 0.74
HIST1H1CP16403 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H1CP16403 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1CP16403 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1CP16403 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1CP16403 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H1CP16403 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1CP16403 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIST1H1CP16403 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1CP16403 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H1CP16403 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H1CP16403 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1CP16403 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
HIST1H1CP16403 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H1CP16403 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H1CP16403 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1CP16403 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1CP16403 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST1H1CP16403 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H1CP16403 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H1CP16403 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.65■□□□□ 0.74
HIST1H1CP16403 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HIST1H1CP16403 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms