Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
UBCP0CG48 AC080038.3-201ENST00000623346 1952 ntBASIC19.24■□□□□ 0.67
UBCP0CG48 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBCP0CG48 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.23■□□□□ 0.67
UBCP0CG48 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UBCP0CG48 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.23■□□□□ 0.67
UBCP0CG48 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.23■□□□□ 0.67
UBCP0CG48 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.23■□□□□ 0.67
UBCP0CG48 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.23■□□□□ 0.67
UBCP0CG48 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBCP0CG48 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBCP0CG48 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBCP0CG48 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBCP0CG48 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBCP0CG48 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBCP0CG48 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBCP0CG48 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBCP0CG48 SLC25A24-204ENST00000569674 2357 ntBASIC19.22■□□□□ 0.67
UBCP0CG48 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.22■□□□□ 0.67
UBCP0CG48 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.21■□□□□ 0.67
UBCP0CG48 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.21■□□□□ 0.67
UBCP0CG48 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 DUX4L4-201ENST00000566884 1269 ntBASIC19.21■□□□□ 0.67
UBCP0CG48 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.21■□□□□ 0.67
UBCP0CG48 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
UBCP0CG48 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBCP0CG48 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.21■□□□□ 0.67
UBCP0CG48 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBCP0CG48 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.2■□□□□ 0.66
UBCP0CG48 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.2■□□□□ 0.66
UBCP0CG48 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBCP0CG48 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBCP0CG48 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.2■□□□□ 0.66
UBCP0CG48 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.2■□□□□ 0.66
UBCP0CG48 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
UBCP0CG48 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.2■□□□□ 0.66
UBCP0CG48 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
UBCP0CG48 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
UBCP0CG48 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBCP0CG48 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
UBCP0CG48 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBCP0CG48 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.19■□□□□ 0.66
UBCP0CG48 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.19■□□□□ 0.66
UBCP0CG48 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.19■□□□□ 0.66
UBCP0CG48 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.19■□□□□ 0.66
UBCP0CG48 LINC01960-201ENST00000563759 1884 ntBASIC19.19■□□□□ 0.66
UBCP0CG48 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
UBCP0CG48 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
UBCP0CG48 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBCP0CG48 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.18■□□□□ 0.66
UBCP0CG48 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBCP0CG48 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBCP0CG48 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBCP0CG48 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBCP0CG48 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBCP0CG48 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBCP0CG48 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.17■□□□□ 0.66
UBCP0CG48 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBCP0CG48 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.17■□□□□ 0.66
UBCP0CG48 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.17■□□□□ 0.66
UBCP0CG48 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.17■□□□□ 0.66
UBCP0CG48 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBCP0CG48 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBCP0CG48 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms