Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 AC079630.1-202ENST00000618127 1840 ntBASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 AC022517.1-201ENST00000592429 346 ntBASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 AC133561.1-201ENST00000568600 2415 ntBASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB40ALP0C0E4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB40ALP0C0E4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB40ALP0C0E4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 KRT18P14-201ENST00000534205 1250 ntBASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 AC004812.2-201ENST00000611079 2094 ntBASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB40ALP0C0E4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB40ALP0C0E4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB40ALP0C0E4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms