Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL4A2P08572 AL355802.2-201ENST00000402069 882 ntBASIC22.52■■□□□ 1.2
COL4A2P08572 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.52■■□□□ 1.2
COL4A2P08572 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.52■■□□□ 1.2
COL4A2P08572 AC068587.7-201ENST00000641602 218 ntBASIC22.52■■□□□ 1.2
COL4A2P08572 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
COL4A2P08572 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL4A2P08572 KRT19P1-201ENST00000405746 1186 ntBASIC22.51■■□□□ 1.19
COL4A2P08572 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A2P08572 AC142381.3-201ENST00000568208 1670 ntBASIC22.51■■□□□ 1.19
COL4A2P08572 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A2P08572 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A2P08572 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A2P08572 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL4A2P08572 AL050303.2-201ENST00000619798 666 ntBASIC22.51■■□□□ 1.19
COL4A2P08572 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.51■■□□□ 1.19
COL4A2P08572 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A2P08572 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A2P08572 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
COL4A2P08572 MFSD11-216ENST00000590393 1141 ntBASIC22.5■■□□□ 1.19
COL4A2P08572 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL4A2P08572 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL4A2P08572 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL4A2P08572 NCF1B-203ENST00000435988 1254 ntBASIC22.49■■□□□ 1.19
COL4A2P08572 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.49■■□□□ 1.19
COL4A2P08572 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL4A2P08572 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.49■■□□□ 1.19
COL4A2P08572 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.48■■□□□ 1.19
COL4A2P08572 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.48■■□□□ 1.19
COL4A2P08572 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 AC006970.2-201ENST00000450065 779 ntBASIC22.48■■□□□ 1.19
COL4A2P08572 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.48■■□□□ 1.19
COL4A2P08572 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
COL4A2P08572 AC087239.1-201ENST00000622671 572 ntBASIC22.48■■□□□ 1.19
COL4A2P08572 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.48■■□□□ 1.19
COL4A2P08572 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL4A2P08572 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL4A2P08572 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL4A2P08572 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL4A2P08572 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL4A2P08572 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL4A2P08572 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL4A2P08572 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A2P08572 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL4A2P08572 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.46■■□□□ 1.19
COL4A2P08572 AL109923.1-201ENST00000618799 583 ntBASIC22.46■■□□□ 1.19
COL4A2P08572 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
COL4A2P08572 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
COL4A2P08572 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.46■■□□□ 1.19
COL4A2P08572 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.45■■□□□ 1.19
COL4A2P08572 GUSBP6-202ENST00000438529 1198 ntBASIC22.45■■□□□ 1.19
COL4A2P08572 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
COL4A2P08572 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.45■■□□□ 1.19
COL4A2P08572 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.45■■□□□ 1.19
COL4A2P08572 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.45■■□□□ 1.19
COL4A2P08572 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL4A2P08572 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A2P08572 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.45■■□□□ 1.18
COL4A2P08572 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.45■■□□□ 1.18
COL4A2P08572 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.45■■□□□ 1.18
COL4A2P08572 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COL4A2P08572 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL4A2P08572 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.44■■□□□ 1.18
COL4A2P08572 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.44■■□□□ 1.18
COL4A2P08572 AC010141.3-201ENST00000456659 717 ntBASIC22.44■■□□□ 1.18
COL4A2P08572 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.44■■□□□ 1.18
COL4A2P08572 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.44■■□□□ 1.18
COL4A2P08572 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.44■■□□□ 1.18
COL4A2P08572 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
COL4A2P08572 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A2P08572 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.43■■□□□ 1.18
COL4A2P08572 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A2P08572 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A2P08572 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
COL4A2P08572 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A2P08572 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.43■■□□□ 1.18
COL4A2P08572 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL4A2P08572 SLC7A5P2-201ENST00000553010 536 ntBASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms