Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.95■□□□□ 0.94
CTSBP07858 AC087623.3-201ENST00000607047 1098 ntBASIC20.95■□□□□ 0.94
CTSBP07858 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSBP07858 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CTSBP07858 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSBP07858 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
CTSBP07858 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.94■□□□□ 0.94
CTSBP07858 AP005435.1-201ENST00000529293 1178 ntBASIC20.94■□□□□ 0.94
CTSBP07858 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.94■□□□□ 0.94
CTSBP07858 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.94■□□□□ 0.94
CTSBP07858 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.94■□□□□ 0.94
CTSBP07858 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.94■□□□□ 0.94
CTSBP07858 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSBP07858 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CTSBP07858 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
CTSBP07858 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSBP07858 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CTSBP07858 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSBP07858 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSBP07858 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.93■□□□□ 0.94
CTSBP07858 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
CTSBP07858 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSBP07858 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.93■□□□□ 0.94
CTSBP07858 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CTSBP07858 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSBP07858 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
CTSBP07858 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
CTSBP07858 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CTSBP07858 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSBP07858 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSBP07858 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSBP07858 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTSBP07858 MIR572-201ENST00000384983 95 ntBASIC20.92■□□□□ 0.94
CTSBP07858 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSBP07858 AL031602.1-201ENST00000633169 911 ntBASIC20.92■□□□□ 0.94
CTSBP07858 C9orf163-202ENST00000624034 2573 ntBASIC20.92■□□□□ 0.94
CTSBP07858 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CTSBP07858 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSBP07858 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSBP07858 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.92■□□□□ 0.94
CTSBP07858 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSBP07858 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSBP07858 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CTSBP07858 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSBP07858 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTSBP07858 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSBP07858 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.9■□□□□ 0.94
CTSBP07858 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSBP07858 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSBP07858 AC097381.1-201ENST00000429019 1296 ntBASIC20.9■□□□□ 0.94
CTSBP07858 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSBP07858 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.9■□□□□ 0.94
CTSBP07858 MIR6821-201ENST00000617625 74 ntBASIC20.9■□□□□ 0.94
CTSBP07858 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSBP07858 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSBP07858 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CTSBP07858 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSBP07858 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
CTSBP07858 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSBP07858 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.89■□□□□ 0.93
CTSBP07858 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.89■□□□□ 0.93
CTSBP07858 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.89■□□□□ 0.93
CTSBP07858 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSBP07858 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CTSBP07858 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSBP07858 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSBP07858 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSBP07858 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CTSBP07858 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CTSBP07858 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSBP07858 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSBP07858 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.88■□□□□ 0.93
CTSBP07858 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSBP07858 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTSBP07858 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSBP07858 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CTSBP07858 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.88■□□□□ 0.93
CTSBP07858 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSBP07858 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CTSBP07858 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSBP07858 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.87■□□□□ 0.93
CTSBP07858 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSBP07858 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.87■□□□□ 0.93
CTSBP07858 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTSBP07858 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.87■□□□□ 0.93
CTSBP07858 AC012414.1-201ENST00000556676 535 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms