Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
MT-ND3P03897 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
MT-ND3P03897 AC139530.1-201ENST00000575312 1977 ntBASIC22.32■■□□□ 1.16
MT-ND3P03897 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.32■■□□□ 1.16
MT-ND3P03897 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.32■■□□□ 1.16
MT-ND3P03897 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-ND3P03897 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
MT-ND3P03897 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-ND3P03897 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MT-ND3P03897 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.31■■□□□ 1.16
MT-ND3P03897 MTDHP2-201ENST00000601468 714 ntBASIC22.31■■□□□ 1.16
MT-ND3P03897 AC010997.5-201ENST00000609182 354 ntBASIC22.31■■□□□ 1.16
MT-ND3P03897 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.31■■□□□ 1.16
MT-ND3P03897 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.31■■□□□ 1.16
MT-ND3P03897 C11orf96-202ENST00000528572 1834 ntBASIC22.31■■□□□ 1.16
MT-ND3P03897 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MT-ND3P03897 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-ND3P03897 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.3■■□□□ 1.16
MT-ND3P03897 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MT-ND3P03897 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-ND3P03897 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MT-ND3P03897 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MT-ND3P03897 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.3■■□□□ 1.16
MT-ND3P03897 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 AF131216.4-201ENST00000638924 1588 ntBASIC22.29■■□□□ 1.16
MT-ND3P03897 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
MT-ND3P03897 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.29■■□□□ 1.16
MT-ND3P03897 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-ND3P03897 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
MT-ND3P03897 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 AC004448.1-201ENST00000458332 883 ntBASIC22.29■■□□□ 1.16
MT-ND3P03897 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-ND3P03897 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.29■■□□□ 1.16
MT-ND3P03897 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND3P03897 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
MT-ND3P03897 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MT-ND3P03897 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-ND3P03897 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MT-ND3P03897 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-ND3P03897 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.28■■□□□ 1.16
MT-ND3P03897 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.28■■□□□ 1.16
MT-ND3P03897 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MT-ND3P03897 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MT-ND3P03897 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
MT-ND3P03897 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND3P03897 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND3P03897 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-ND3P03897 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-ND3P03897 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND3P03897 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND3P03897 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND3P03897 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND3P03897 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-ND3P03897 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MT-ND3P03897 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
MT-ND3P03897 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND3P03897 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND3P03897 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND3P03897 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.26■■□□□ 1.15
MT-ND3P03897 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.26■■□□□ 1.15
MT-ND3P03897 MIR6724-1-201ENST00000616420 92 ntBASIC22.26■■□□□ 1.15
MT-ND3P03897 MIR6724-2-201ENST00000616483 92 ntBASIC22.26■■□□□ 1.15
MT-ND3P03897 MIR6724-4-201ENST00000617390 92 ntBASIC22.26■■□□□ 1.15
MT-ND3P03897 MIR6724-3-201ENST00000622482 92 ntBASIC22.26■■□□□ 1.15
MT-ND3P03897 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND3P03897 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND3P03897 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.26■■□□□ 1.15
MT-ND3P03897 AC080038.3-201ENST00000623346 1952 ntBASIC22.26■■□□□ 1.15
MT-ND3P03897 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MT-ND3P03897 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
MT-ND3P03897 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.25■■□□□ 1.15
MT-ND3P03897 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MT-ND3P03897 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND3P03897 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.25■■□□□ 1.15
MT-ND3P03897 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.25■■□□□ 1.15
MT-ND3P03897 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND3P03897 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND3P03897 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND3P03897 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.25■■□□□ 1.15
MT-ND3P03897 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND3P03897 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.25■■□□□ 1.15
MT-ND3P03897 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND3P03897 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms