Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CNOT4O95628 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT4O95628 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT4O95628 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT4O95628 AP005435.1-201ENST00000529293 1178 ntBASIC19.47■□□□□ 0.71
CNOT4O95628 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.47■□□□□ 0.71
CNOT4O95628 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.47■□□□□ 0.71
CNOT4O95628 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT4O95628 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CNOT4O95628 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT4O95628 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNOT4O95628 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CNOT4O95628 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.47■□□□□ 0.71
CNOT4O95628 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CNOT4O95628 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT4O95628 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CNOT4O95628 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CNOT4O95628 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 AC126544.1-201ENST00000580842 1059 ntBASIC19.46■□□□□ 0.71
CNOT4O95628 MIR6821-201ENST00000617625 74 ntBASIC19.46■□□□□ 0.71
CNOT4O95628 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNOT4O95628 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNOT4O95628 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.46■□□□□ 0.71
CNOT4O95628 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT4O95628 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT4O95628 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT4O95628 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CNOT4O95628 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNOT4O95628 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNOT4O95628 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.45■□□□□ 0.7
CNOT4O95628 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.45■□□□□ 0.7
CNOT4O95628 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.45■□□□□ 0.7
CNOT4O95628 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNOT4O95628 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CNOT4O95628 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CNOT4O95628 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT4O95628 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT4O95628 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT4O95628 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT4O95628 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNOT4O95628 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
CNOT4O95628 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.44■□□□□ 0.7
CNOT4O95628 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT4O95628 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.44■□□□□ 0.7
CNOT4O95628 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNOT4O95628 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.43■□□□□ 0.7
CNOT4O95628 AC097381.1-201ENST00000429019 1296 ntBASIC19.43■□□□□ 0.7
CNOT4O95628 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNOT4O95628 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT4O95628 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
CNOT4O95628 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNOT4O95628 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT4O95628 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT4O95628 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.42■□□□□ 0.7
CNOT4O95628 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT4O95628 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CNOT4O95628 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CNOT4O95628 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CNOT4O95628 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT4O95628 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT4O95628 AC004687.1-201ENST00000579003 1625 ntBASIC19.41■□□□□ 0.7
CNOT4O95628 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.41■□□□□ 0.7
CNOT4O95628 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT4O95628 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT4O95628 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT4O95628 IGHV3-19-201ENST00000521488 291 ntBASIC19.41■□□□□ 0.7
CNOT4O95628 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT4O95628 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNOT4O95628 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT4O95628 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CNOT4O95628 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT4O95628 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CNOT4O95628 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNOT4O95628 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT4O95628 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT4O95628 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT4O95628 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms