Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
RPP40O75818 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPP40O75818 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.6■■□□□ 1.21
RPP40O75818 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPP40O75818 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RPP40O75818 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RPP40O75818 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPP40O75818 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RPP40O75818 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.59■■□□□ 1.21
RPP40O75818 NTF6G-201ENST00000591094 616 ntBASIC22.59■■□□□ 1.21
RPP40O75818 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.59■■□□□ 1.21
RPP40O75818 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RPP40O75818 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.59■■□□□ 1.21
RPP40O75818 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.58■■□□□ 1.21
RPP40O75818 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RPP40O75818 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RPP40O75818 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RPP40O75818 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RPP40O75818 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RPP40O75818 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RPP40O75818 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.58■■□□□ 1.2
RPP40O75818 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RPP40O75818 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.57■■□□□ 1.2
RPP40O75818 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RPP40O75818 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.57■■□□□ 1.2
RPP40O75818 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.57■■□□□ 1.2
RPP40O75818 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.57■■□□□ 1.2
RPP40O75818 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.57■■□□□ 1.2
RPP40O75818 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RPP40O75818 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.56■■□□□ 1.2
RPP40O75818 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RPP40O75818 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
RPP40O75818 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.56■■□□□ 1.2
RPP40O75818 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.56■■□□□ 1.2
RPP40O75818 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.56■■□□□ 1.2
RPP40O75818 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.56■■□□□ 1.2
RPP40O75818 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RPP40O75818 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.56■■□□□ 1.2
RPP40O75818 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 KRT18P14-201ENST00000534205 1250 ntBASIC22.55■■□□□ 1.2
RPP40O75818 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.55■■□□□ 1.2
RPP40O75818 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.55■■□□□ 1.2
RPP40O75818 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.55■■□□□ 1.2
RPP40O75818 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.55■■□□□ 1.2
RPP40O75818 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.55■■□□□ 1.2
RPP40O75818 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPP40O75818 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.54■■□□□ 1.2
RPP40O75818 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.54■■□□□ 1.2
RPP40O75818 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.54■■□□□ 1.2
RPP40O75818 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RPP40O75818 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPP40O75818 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.54■■□□□ 1.2
RPP40O75818 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP40O75818 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.53■■□□□ 1.2
RPP40O75818 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPP40O75818 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.53■■□□□ 1.2
RPP40O75818 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP40O75818 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RPP40O75818 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPP40O75818 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms