Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.02■□□□□ 0.96
CPNE3O75131 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPNE3O75131 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.02■□□□□ 0.96
CPNE3O75131 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPNE3O75131 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
CPNE3O75131 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CPNE3O75131 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CPNE3O75131 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
CPNE3O75131 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CPNE3O75131 AC004812.2-201ENST00000611079 2094 ntBASIC21.01■□□□□ 0.95
CPNE3O75131 AC068473.5-201ENST00000616428 2072 ntBASIC21.01■□□□□ 0.95
CPNE3O75131 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
CPNE3O75131 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE3O75131 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
CPNE3O75131 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPNE3O75131 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.01■□□□□ 0.95
CPNE3O75131 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE3O75131 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE3O75131 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.01■□□□□ 0.95
CPNE3O75131 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CPNE3O75131 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPNE3O75131 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE3O75131 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE3O75131 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE3O75131 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE3O75131 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21■□□□□ 0.95
CPNE3O75131 AP005435.1-201ENST00000529293 1178 ntBASIC21■□□□□ 0.95
CPNE3O75131 AC012414.1-201ENST00000556676 535 ntBASIC21■□□□□ 0.95
CPNE3O75131 AL354811.1-201ENST00000610286 706 ntBASIC21■□□□□ 0.95
CPNE3O75131 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21■□□□□ 0.95
CPNE3O75131 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPNE3O75131 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 AC027612.3-201ENST00000413684 1047 ntBASIC20.99■□□□□ 0.95
CPNE3O75131 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE3O75131 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CPNE3O75131 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.99■□□□□ 0.95
CPNE3O75131 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPNE3O75131 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPNE3O75131 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE3O75131 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.98■□□□□ 0.95
CPNE3O75131 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.98■□□□□ 0.95
CPNE3O75131 AC034268.1-201ENST00000441047 882 ntBASIC20.98■□□□□ 0.95
CPNE3O75131 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.98■□□□□ 0.95
CPNE3O75131 AC079630.1-202ENST00000618127 1840 ntBASIC20.98■□□□□ 0.95
CPNE3O75131 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPNE3O75131 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPNE3O75131 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CPNE3O75131 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CPNE3O75131 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CPNE3O75131 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.97■□□□□ 0.95
CPNE3O75131 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPNE3O75131 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE3O75131 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE3O75131 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE3O75131 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE3O75131 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
CPNE3O75131 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.96■□□□□ 0.95
CPNE3O75131 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.96■□□□□ 0.95
CPNE3O75131 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE3O75131 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE3O75131 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.96■□□□□ 0.95
CPNE3O75131 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPNE3O75131 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE3O75131 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE3O75131 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms