Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC28A2O43868 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC28A2O43868 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.07■□□□□ 0.96
SLC28A2O43868 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC28A2O43868 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC28A2O43868 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC28A2O43868 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SLC28A2O43868 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC28A2O43868 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.06■□□□□ 0.96
SLC28A2O43868 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC28A2O43868 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC28A2O43868 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC28A2O43868 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC28A2O43868 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC28A2O43868 AL031602.1-201ENST00000633169 911 ntBASIC21.06■□□□□ 0.96
SLC28A2O43868 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC28A2O43868 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SLC28A2O43868 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SLC28A2O43868 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC28A2O43868 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SLC28A2O43868 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SLC28A2O43868 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC28A2O43868 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC28A2O43868 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L2-201ENST00000561772 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 AL138724.1-201ENST00000606771 1088 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L6-201ENST00000626483 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L1-201ENST00000627662 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L8-201ENST00000629013 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L3-201ENST00000630187 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L7-201ENST00000630678 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 DUX4L5-201ENST00000630834 1275 ntBASIC21.05■□□□□ 0.96
SLC28A2O43868 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC28A2O43868 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC28A2O43868 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC28A2O43868 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SLC28A2O43868 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC28A2O43868 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC28A2O43868 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC28A2O43868 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC28A2O43868 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 AC099791.2-201ENST00000605725 427 ntBASIC21.03■□□□□ 0.96
SLC28A2O43868 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC28A2O43868 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC28A2O43868 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC28A2O43868 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC28A2O43868 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SLC28A2O43868 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SLC28A2O43868 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.02■□□□□ 0.96
SLC28A2O43868 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC28A2O43868 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC28A2O43868 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC28A2O43868 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC28A2O43868 AC005703.6-201ENST00000623265 1329 ntBASIC21.02■□□□□ 0.95
SLC28A2O43868 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms