Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
PHGDHO43175 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PHGDHO43175 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PHGDHO43175 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PHGDHO43175 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PHGDHO43175 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.86■■□□□ 1.09
PHGDHO43175 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.86■■□□□ 1.09
PHGDHO43175 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PHGDHO43175 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.86■■□□□ 1.09
PHGDHO43175 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.86■■□□□ 1.09
PHGDHO43175 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PHGDHO43175 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.86■■□□□ 1.09
PHGDHO43175 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PHGDHO43175 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PHGDHO43175 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PHGDHO43175 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PHGDHO43175 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.85■■□□□ 1.09
PHGDHO43175 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PHGDHO43175 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.85■■□□□ 1.09
PHGDHO43175 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PHGDHO43175 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PHGDHO43175 AC009086.3-201ENST00000623486 1008 ntBASIC21.85■■□□□ 1.09
PHGDHO43175 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PHGDHO43175 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PHGDHO43175 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.85■■□□□ 1.09
PHGDHO43175 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PHGDHO43175 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PHGDHO43175 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PHGDHO43175 LINC01960-201ENST00000563759 1884 ntBASIC21.83■■□□□ 1.09
PHGDHO43175 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PHGDHO43175 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PHGDHO43175 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PHGDHO43175 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PHGDHO43175 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PHGDHO43175 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.83■■□□□ 1.09
PHGDHO43175 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PHGDHO43175 AC004687.1-201ENST00000579003 1625 ntBASIC21.83■■□□□ 1.08
PHGDHO43175 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PHGDHO43175 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PHGDHO43175 C11orf96-202ENST00000528572 1834 ntBASIC21.83■■□□□ 1.08
PHGDHO43175 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.82■■□□□ 1.08
PHGDHO43175 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PHGDHO43175 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.82■■□□□ 1.08
PHGDHO43175 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PHGDHO43175 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PHGDHO43175 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PHGDHO43175 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.81■■□□□ 1.08
PHGDHO43175 C17orf82-201ENST00000623772 1530 ntBASIC21.81■■□□□ 1.08
PHGDHO43175 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.81■■□□□ 1.08
PHGDHO43175 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 AC137767.1-201ENST00000602918 1920 ntBASIC21.81■■□□□ 1.08
PHGDHO43175 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHGDHO43175 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PHGDHO43175 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
PHGDHO43175 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PHGDHO43175 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.8■■□□□ 1.08
PHGDHO43175 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.8■■□□□ 1.08
PHGDHO43175 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.8■■□□□ 1.08
PHGDHO43175 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHGDHO43175 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.79■■□□□ 1.08
PHGDHO43175 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PHGDHO43175 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.79■■□□□ 1.08
PHGDHO43175 UNC93B8-201ENST00000511903 705 ntBASIC21.79■■□□□ 1.08
PHGDHO43175 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHGDHO43175 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHGDHO43175 AC007375.3-201ENST00000600936 2314 ntBASIC21.78■■□□□ 1.08
PHGDHO43175 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHGDHO43175 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHGDHO43175 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.78■■□□□ 1.08
PHGDHO43175 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.78■■□□□ 1.08
PHGDHO43175 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PHGDHO43175 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHGDHO43175 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.78■■□□□ 1.08
PHGDHO43175 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms