Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.38■■□□□ 1.01
UBFD1O14562 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.37■■□□□ 1.01
UBFD1O14562 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.37■■□□□ 1.01
UBFD1O14562 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.37■■□□□ 1.01
UBFD1O14562 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.37■■□□□ 1.01
UBFD1O14562 AC004687.1-201ENST00000579003 1625 ntBASIC21.37■■□□□ 1.01
UBFD1O14562 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.37■■□□□ 1.01
UBFD1O14562 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.37■■□□□ 1.01
UBFD1O14562 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 Z92544.1-202ENST00000571933 1220 ntBASIC21.37■■□□□ 1.01
UBFD1O14562 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.37■■□□□ 1.01
UBFD1O14562 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 AL137060.1-201ENST00000618151 2648 ntBASIC21.37■■□□□ 1.01
UBFD1O14562 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UBFD1O14562 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBFD1O14562 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.36■■□□□ 1.01
UBFD1O14562 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.36■■□□□ 1.01
UBFD1O14562 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 MIR4787-201ENST00000607364 84 ntBASIC21.36■■□□□ 1.01
UBFD1O14562 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
UBFD1O14562 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.36■■□□□ 1.01
UBFD1O14562 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBFD1O14562 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
UBFD1O14562 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBFD1O14562 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.35■■□□□ 1.01
UBFD1O14562 RARRES2P1-201ENST00000474487 481 ntBASIC21.35■■□□□ 1.01
UBFD1O14562 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.35■■□□□ 1.01
UBFD1O14562 KRT125P-201ENST00000546827 989 ntBASIC21.35■■□□□ 1.01
UBFD1O14562 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBFD1O14562 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBFD1O14562 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UBFD1O14562 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBFD1O14562 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
UBFD1O14562 C17orf82-201ENST00000623772 1530 ntBASIC21.34■■□□□ 1.01
UBFD1O14562 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBFD1O14562 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.34■■□□□ 1.01
UBFD1O14562 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBFD1O14562 MTDHP2-201ENST00000601468 714 ntBASIC21.34■■□□□ 1.01
UBFD1O14562 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
UBFD1O14562 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.33■■□□□ 1.01
UBFD1O14562 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBFD1O14562 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBFD1O14562 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.33■■□□□ 1.01
UBFD1O14562 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBFD1O14562 AC239859.2-201ENST00000444165 318 ntBASIC21.33■■□□□ 1.01
UBFD1O14562 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.33■■□□□ 1.01
UBFD1O14562 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBFD1O14562 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.33■■□□□ 1
UBFD1O14562 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBFD1O14562 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.33■■□□□ 1
UBFD1O14562 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBFD1O14562 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.33■■□□□ 1
UBFD1O14562 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBFD1O14562 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
UBFD1O14562 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.32■■□□□ 1
UBFD1O14562 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBFD1O14562 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
UBFD1O14562 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.32■■□□□ 1
UBFD1O14562 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
UBFD1O14562 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 AC010997.5-201ENST00000609182 354 ntBASIC21.31■■□□□ 1
UBFD1O14562 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.31■■□□□ 1
UBFD1O14562 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBFD1O14562 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.31■■□□□ 1
UBFD1O14562 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms