Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC28A1O00337 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC28A1O00337 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SLC28A1O00337 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC28A1O00337 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC28A1O00337 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC28A1O00337 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 TSPY9P-201ENST00000440215 945 ntBASIC21.16■□□□□ 0.98
SLC28A1O00337 TSPY11P-201ENST00000442607 1045 ntBASIC21.16■□□□□ 0.98
SLC28A1O00337 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC28A1O00337 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 C17orf82-201ENST00000623772 1530 ntBASIC21.15■□□□□ 0.98
SLC28A1O00337 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 AC009299.2-201ENST00000482477 511 ntBASIC21.15■□□□□ 0.98
SLC28A1O00337 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SLC28A1O00337 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC28A1O00337 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
SLC28A1O00337 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC28A1O00337 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC28A1O00337 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.14■□□□□ 0.98
SLC28A1O00337 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
SLC28A1O00337 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC28A1O00337 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC28A1O00337 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SLC28A1O00337 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC28A1O00337 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC28A1O00337 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC28A1O00337 AC004687.1-201ENST00000579003 1625 ntBASIC21.14■□□□□ 0.97
SLC28A1O00337 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC28A1O00337 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.13■□□□□ 0.97
SLC28A1O00337 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC28A1O00337 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SLC28A1O00337 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC28A1O00337 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC28A1O00337 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC28A1O00337 PKD1P6-201ENST00000343738 4769 ntBASIC21.12■□□□□ 0.97
SLC28A1O00337 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC28A1O00337 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC28A1O00337 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC28A1O00337 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC28A1O00337 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC28A1O00337 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
SLC28A1O00337 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC28A1O00337 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC28A1O00337 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC28A1O00337 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC28A1O00337 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC28A1O00337 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC28A1O00337 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC28A1O00337 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC28A1O00337 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC28A1O00337 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SLC28A1O00337 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms