Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.32■□□□□ 0.52
RNF223E7ERA6 AC011767.1-201ENST00000617410 1153 ntBASIC18.32■□□□□ 0.52
RNF223E7ERA6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF223E7ERA6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF223E7ERA6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 MIR663A-201ENST00000385250 93 ntBASIC18.31■□□□□ 0.52
RNF223E7ERA6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF223E7ERA6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF223E7ERA6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 NCF1B-203ENST00000435988 1254 ntBASIC18.3■□□□□ 0.52
RNF223E7ERA6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 AC004687.1-201ENST00000579003 1625 ntBASIC18.3■□□□□ 0.52
RNF223E7ERA6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF223E7ERA6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF223E7ERA6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RNF223E7ERA6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF223E7ERA6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 KRT18P11-201ENST00000435214 1283 ntBASIC18.28■□□□□ 0.52
RNF223E7ERA6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 AC087239.1-201ENST00000622671 572 ntBASIC18.28■□□□□ 0.52
RNF223E7ERA6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF223E7ERA6 ESRRAP2-201ENST00000418437 1549 ntBASIC18.28■□□□□ 0.52
RNF223E7ERA6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF223E7ERA6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
RNF223E7ERA6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF223E7ERA6 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
RNF223E7ERA6 AC079140.4-201ENST00000507448 529 ntBASIC18.27■□□□□ 0.52
RNF223E7ERA6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF223E7ERA6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF223E7ERA6 TMEM191A-211ENST00000637163 1067 ntBASIC18.27■□□□□ 0.52
RNF223E7ERA6 AC068587.7-201ENST00000641602 218 ntBASIC18.27■□□□□ 0.52
RNF223E7ERA6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF223E7ERA6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF223E7ERA6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF223E7ERA6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF223E7ERA6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms