Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV21A0A0B4J279 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRAV21A0A0B4J279 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 MIR6722-201ENST00000617286 78 ntBASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 AC087742.1-201ENST00000575880 1738 ntBASIC16.31■□□□□ 0.2
TRAV21A0A0B4J279 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 KRT8P33-201ENST00000508125 1423 ntBASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 AC103834.1-201ENST00000520383 144 ntBASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 AC103724.3-201ENST00000564481 992 ntBASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 AC009086.3-201ENST00000623486 1008 ntBASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV21A0A0B4J279 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 AC080038.3-201ENST00000623346 1952 ntBASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 AL031848.2-201ENST00000607670 837 ntBASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV21A0A0B4J279 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV21A0A0B4J279 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
TRAV21A0A0B4J279 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms