Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV4A0A0B4J268 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 C17orf82-201ENST00000623772 1530 ntBASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV4A0A0B4J268 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 GUSBP5-202ENST00000510805 1989 ntBASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 AL117332.1-201ENST00000622628 974 ntBASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV4A0A0B4J268 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 AC127496.7-201ENST00000625110 1798 ntBASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV4A0A0B4J268 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV4A0A0B4J268 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 GUSBP5-201ENST00000418136 578 ntBASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV4A0A0B4J268 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms