Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 THA1P-201ENST00000590384 1145 ntBASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV13-1A0A0B4J241 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 AL024507.2-201ENST00000606070 2574 ntBASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV13-1A0A0B4J241 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 AC092053.2-201ENST00000640557 1818 ntBASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-1A0A0B4J241 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 AF131216.4-201ENST00000638924 1588 ntBASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV13-1A0A0B4J241 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 C11orf96-202ENST00000528572 1834 ntBASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 AC004448.1-201ENST00000458332 883 ntBASIC15.22■□□□□ 0.03
TRAV13-1A0A0B4J241 MIR4281-201ENST00000580852 62 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms