Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL359510.1-201ENST00000413855 208 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AL117382.1-201ENST00000438702 754 ntTSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AC132872.1-201ENST00000566986 1195 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AP001010.1-201ENST00000588397 538 ntTSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 ZRANB2-207ENST00000611683 1257 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 CICP24-201ENST00000605464 2705 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 C16orf46-201ENST00000299578 1605 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AC239801.1-201ENST00000458399 1398 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 AL645820.1-201ENST00000623445 1673 ntBASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RIMBP3Q9UFD9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 OR10G3-201ENST00000303532 942 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 IGLV1-47-201ENST00000390294 407 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AL591644.1-201ENST00000436102 764 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AL513523.4-201ENST00000453778 235 ntTSL 3 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 RN7SL299P-201ENST00000464573 280 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AC138819.1-201ENST00000509363 431 ntTSL 3 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 IGLVI-63-201ENST00000524184 384 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 RN7SL615P-201ENST00000584065 298 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ZNF222-202ENST00000391960 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 LSINCT5-201ENST00000626215 2647 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ZNF493-204ENST00000594390 1536 ntTSL 2 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 LINC01480-204ENST00000597199 1718 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 LINC00408-201ENST00000447784 560 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 COMMD9-203ENST00000452374 917 ntTSL 2 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ADAMTS12-206ENST00000515401 1003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AC083841.3-202ENST00000519411 349 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 AP003059.2-201ENST00000532979 503 ntTSL 3 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 BOD1P2-201ENST00000578494 481 ntBASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIMBP3Q9UFD9 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 MIR182-201ENST00000385255 110 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 NDUFB5P2-201ENST00000398690 566 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AC010883.1-201ENST00000423354 398 ntTSL 3 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AL109936.1-201ENST00000442089 460 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AC005041.2-201ENST00000448783 982 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AC009078.1-201ENST00000474978 783 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 ZNF814-209ENST00000597342 648 ntTSL 3 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AC008750.6-201ENST00000598746 322 ntBASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 EIF4E2-203ENST00000409167 1372 ntTSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIMBP3Q9UFD9 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIMBP3Q9UFD9 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIMBP3Q9UFD9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RIMBP3Q9UFD9 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIMBP3Q9UFD9 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RIMBP3Q9UFD9 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms