Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRM3P20309 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CHRM3P20309 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRM3P20309 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHRM3P20309 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.3
CHRM3P20309 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 ZDHHC8P1-202ENST00000418264 1403 ntBASIC13.21□□□□□ -0.3
CHRM3P20309 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
CHRM3P20309 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC13.21□□□□□ -0.3
CHRM3P20309 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRM3P20309 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 AC021305.1-201ENST00000520656 1514 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CHRM3P20309 AP000354.1-201ENST00000396982 456 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHRM3P20309 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.2□□□□□ -0.3
CHRM3P20309 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 AC008026.2-201ENST00000495438 348 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.2□□□□□ -0.3
CHRM3P20309 AL359219.1-201ENST00000556311 934 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 DNM1P30-201ENST00000563586 452 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRM3P20309 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 MIR4687-201ENST00000583618 80 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 AP001462.1-201ENST00000594089 452 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 AC011247.3-201ENST00000603297 438 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 AL136982.5-201ENST00000605222 294 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 KRT8P25-201ENST00000473150 1456 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 AC091181.1-201ENST00000623762 2098 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CHRM3P20309 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRM3P20309 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 AC131902.2-201ENST00000566892 2172 ntBASIC13.2□□□□□ -0.3
CHRM3P20309 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.2□□□□□ -0.3
CHRM3P20309 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRM3P20309 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
CHRM3P20309 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHRM3P20309 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.19□□□□□ -0.3
CHRM3P20309 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CHRM3P20309 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRM3P20309 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.19□□□□□ -0.3
CHRM3P20309 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHRM3P20309 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms