Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC1P02654 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC1P02654 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC11.82□□□□□ -0.52
APOC1P02654 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC11.82□□□□□ -0.52
APOC1P02654 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC11.82□□□□□ -0.52
APOC1P02654 RN7SL720P-201ENST00000488178 304 ntBASIC11.82□□□□□ -0.52
APOC1P02654 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.82□□□□□ -0.52
APOC1P02654 MIR4525-201ENST00000580000 75 ntBASIC11.82□□□□□ -0.52
APOC1P02654 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 AC026304.1-201ENST00000597953 561 ntBASIC11.82□□□□□ -0.52
APOC1P02654 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 MIR8071-1-201ENST00000616769 65 ntBASIC11.82□□□□□ -0.52
APOC1P02654 MIR8071-2-201ENST00000616772 65 ntBASIC11.82□□□□□ -0.52
APOC1P02654 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC11.82□□□□□ -0.52
APOC1P02654 AC138627.1-207ENST00000641560 1006 ntBASIC11.82□□□□□ -0.52
APOC1P02654 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC1P02654 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.82□□□□□ -0.52
APOC1P02654 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC1P02654 AL583810.2-201ENST00000556430 3254 ntBASIC11.82□□□□□ -0.52
APOC1P02654 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
APOC1P02654 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 KRT8P42-201ENST00000405771 1399 ntBASIC11.81□□□□□ -0.52
APOC1P02654 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 MSANTD2P1-201ENST00000445341 1368 ntBASIC11.81□□□□□ -0.52
APOC1P02654 FTX-216ENST00000638985 1367 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.81□□□□□ -0.52
APOC1P02654 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
APOC1P02654 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC1P02654 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
APOC1P02654 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC1P02654 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms