Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.5■■■□□ 2.63
NRXN3Q9Y4C0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.49■■■□□ 2.63
NRXN3Q9Y4C0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
NRXN3Q9Y4C0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NRXN3Q9Y4C0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NRXN3Q9Y4C0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NRXN3Q9Y4C0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.48■■■□□ 2.63
NRXN3Q9Y4C0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
NRXN3Q9Y4C0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NRXN3Q9Y4C0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NRXN3Q9Y4C0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 AL355802.2-201ENST00000402069 882 ntBASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NRXN3Q9Y4C0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NRXN3Q9Y4C0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
NRXN3Q9Y4C0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 SMUG1P1-201ENST00000590640 811 ntBASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.45■■■□□ 2.62
NRXN3Q9Y4C0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 AL050303.2-201ENST00000619798 666 ntBASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
NRXN3Q9Y4C0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 NCF1B-203ENST00000435988 1254 ntBASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 BX005040.4-201ENST00000637145 1518 ntBASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 AC079630.1-202ENST00000618127 1840 ntBASIC31.43■■■□□ 2.62
NRXN3Q9Y4C0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.42■■■□□ 2.62
NRXN3Q9Y4C0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NRXN3Q9Y4C0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.41■■■□□ 2.62
NRXN3Q9Y4C0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NRXN3Q9Y4C0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NRXN3Q9Y4C0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 AC006970.2-201ENST00000450065 779 ntBASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 MFSD11-216ENST00000590393 1141 ntBASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.4■■■□□ 2.62
NRXN3Q9Y4C0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 AC138932.3-201ENST00000567634 1902 ntBASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NRXN3Q9Y4C0 GUSBP6-202ENST00000438529 1198 ntBASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 AL109923.1-201ENST00000618799 583 ntBASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 AC004687.1-201ENST00000579003 1625 ntBASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NRXN3Q9Y4C0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms