Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RTCBQ9Y3I0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.2■■■□□ 2.1
RTCBQ9Y3I0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RTCBQ9Y3I0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 AC011767.1-201ENST00000617410 1153 ntBASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 AC022211.4-201ENST00000625094 2161 ntBASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RTCBQ9Y3I0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 KRT18P11-201ENST00000435214 1283 ntBASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
RTCBQ9Y3I0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.16■■■□□ 2.1
RTCBQ9Y3I0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 MIR663A-201ENST00000385250 93 ntBASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RTCBQ9Y3I0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 TMEM191A-211ENST00000637163 1067 ntBASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 AC068587.7-201ENST00000641602 218 ntBASIC28.14■■■□□ 2.1
RTCBQ9Y3I0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RTCBQ9Y3I0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.14■■■□□ 2.09
RTCBQ9Y3I0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RTCBQ9Y3I0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RTCBQ9Y3I0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 ESRRAP2-201ENST00000418437 1549 ntBASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 GPX1P1-201ENST00000388829 606 ntBASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RTCBQ9Y3I0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 SMUG1P1-201ENST00000590640 811 ntBASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RTCBQ9Y3I0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RTCBQ9Y3I0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.1■■■□□ 2.09
RTCBQ9Y3I0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms