Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.39■■■□□ 2.45
NINLQ9Y2I6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
NINLQ9Y2I6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NINLQ9Y2I6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC30.37■■■□□ 2.45
NINLQ9Y2I6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NINLQ9Y2I6 AC034268.1-201ENST00000441047 882 ntBASIC30.37■■■□□ 2.45
NINLQ9Y2I6 MIR6084-201ENST00000622012 110 ntBASIC30.37■■■□□ 2.45
NINLQ9Y2I6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 ANOS2P-203ENST00000472227 1816 ntBASIC30.36■■■□□ 2.45
NINLQ9Y2I6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
NINLQ9Y2I6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NINLQ9Y2I6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC30.35■■■□□ 2.45
NINLQ9Y2I6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
NINLQ9Y2I6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.35■■■□□ 2.45
NINLQ9Y2I6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
NINLQ9Y2I6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.34■■■□□ 2.45
NINLQ9Y2I6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
NINLQ9Y2I6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 ID1-201ENST00000376105 1233 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L2-201ENST00000561772 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L6-201ENST00000626483 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L1-201ENST00000627662 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L8-201ENST00000629013 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L3-201ENST00000630187 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L7-201ENST00000630678 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 DUX4L5-201ENST00000630834 1275 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 AC105233.4-201ENST00000642045 216 ntBASIC30.32■■■□□ 2.44
NINLQ9Y2I6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
NINLQ9Y2I6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 TERF1P2-201ENST00000583350 1212 ntBASIC30.31■■■□□ 2.44
NINLQ9Y2I6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 AC087239.1-201ENST00000622671 572 ntBASIC30.31■■■□□ 2.44
NINLQ9Y2I6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.31■■■□□ 2.44
NINLQ9Y2I6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
NINLQ9Y2I6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms