Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 AC241585.3-202ENST00000628937 1088 ntBASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 AC245100.8-202ENST00000629247 1058 ntBASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 AC080038.3-201ENST00000623346 1952 ntBASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 AC004687.1-201ENST00000579003 1625 ntBASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
POPDC3Q9HBV1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 LINC00565-201ENST00000562710 2331 ntBASIC21.71■■□□□ 1.07
POPDC3Q9HBV1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.7■■□□□ 1.07
POPDC3Q9HBV1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.7■■□□□ 1.07
POPDC3Q9HBV1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.7■■□□□ 1.07
POPDC3Q9HBV1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
POPDC3Q9HBV1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 CA15P2-201ENST00000611168 834 ntBASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
POPDC3Q9HBV1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 GUSBP5-201ENST00000418136 578 ntBASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
POPDC3Q9HBV1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 AC137767.1-201ENST00000602918 1920 ntBASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POPDC3Q9HBV1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms