Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.2■□□□□ 0.99
LRTM1Q9HBL6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 AC080038.3-201ENST00000623346 1952 ntBASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 AC009102.2-201ENST00000606772 1639 ntBASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 AC239859.2-201ENST00000444165 318 ntBASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 AC009086.3-201ENST00000623486 1008 ntBASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
LRTM1Q9HBL6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRTM1Q9HBL6 AC092053.2-201ENST00000640557 1818 ntBASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 AC010997.5-201ENST00000609182 354 ntBASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRTM1Q9HBL6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRTM1Q9HBL6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 TSPY9P-201ENST00000440215 945 ntBASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 TSPY11P-201ENST00000442607 1045 ntBASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 AC009299.2-201ENST00000482477 511 ntBASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRTM1Q9HBL6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRTM1Q9HBL6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 AC137767.1-201ENST00000602918 1920 ntBASIC21.14■□□□□ 0.98
LRTM1Q9HBL6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LRTM1Q9HBL6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 LINC01960-201ENST00000563759 1884 ntBASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRTM1Q9HBL6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms