Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
FAM49AQ9H0Q0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 LINC02228-203ENST00000641970 1355 ntBASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.37■■□□□ 1.49
FAM49AQ9H0Q0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 KRT18P14-201ENST00000534205 1250 ntBASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
FAM49AQ9H0Q0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.35■■□□□ 1.49
FAM49AQ9H0Q0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FAM49AQ9H0Q0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 TERF1P2-201ENST00000583350 1212 ntBASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.33■■□□□ 1.49
FAM49AQ9H0Q0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
FAM49AQ9H0Q0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
FAM49AQ9H0Q0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
FAM49AQ9H0Q0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 NTF6G-201ENST00000591094 616 ntBASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FAM49AQ9H0Q0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
FAM49AQ9H0Q0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms