Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 ABCB10P3-201ENST00000561950 2166 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 Y_RNA.505-201ENST00000384489 102 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AF213884.2-201ENST00000510417 903 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 MTATP6P24-201ENST00000576835 677 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 RNU4-5P-201ENST00000607255 135 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AL357078.3-201ENST00000607528 618 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AC106052.1-201ENST00000608029 497 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AP001596.2-201ENST00000608410 312 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AC126175.1-201ENST00000617041 758 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 AL136981.2-201ENST00000617319 734 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 MTCO1P4-201ENST00000520516 1409 ntBASIC13.47□□□□□ -0.25
KRTAP3-3Q9BYR6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC104455.1-201ENST00000417340 736 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 BMI1P1-201ENST00000445879 941 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC060788.1-201ENST00000521318 469 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 MTND2P32-201ENST00000521584 1038 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC125611.1-201ENST00000549563 229 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC233266.2-201ENST00000567067 528 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 BNIP3P29-201ENST00000598302 571 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC069304.3-201ENST00000603938 1084 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AC018638.6-201ENST00000605007 1267 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 AL354696.1-201ENST00000614652 497 ntBASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.46□□□□□ -0.25
KRTAP3-3Q9BYR6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 MTND3P20-201ENST00000407663 186 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 RPL30P16-201ENST00000419341 429 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 MTND2P16-201ENST00000419987 799 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 DUXAP3-201ENST00000603616 594 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AC079766.1-201ENST00000608774 427 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AC104763.3-201ENST00000613765 618 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AC079336.6-201ENST00000624836 613 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AC073911.2-201ENST00000624989 468 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 MTCO1P6-201ENST00000481192 1384 ntBASIC13.45□□□□□ -0.26
KRTAP3-3Q9BYR6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AL139094.1-201ENST00000405549 1188 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC245060.4-201ENST00000413293 1121 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AL590240.2-201ENST00000413370 894 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 KATNBL1P3-201ENST00000443475 909 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC138701.1-201ENST00000524329 714 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AP001462.1-201ENST00000594089 452 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AL445435.1-201ENST00000604232 665 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC073111.2-201ENST00000605657 1075 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010857.1-201ENST00000606398 594 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 AC010480.1-201ENST00000624823 684 ntBASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
KRTAP3-3Q9BYR6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
KRTAP3-3Q9BYR6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms