Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTX4Q96A99 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.83■□□□□ 0.61
PTX4Q96A99 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTX4Q96A99 AC010542.4-201ENST00000563151 1910 ntBASIC18.83■□□□□ 0.6
PTX4Q96A99 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.83■□□□□ 0.6
PTX4Q96A99 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.83■□□□□ 0.6
PTX4Q96A99 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.83■□□□□ 0.6
PTX4Q96A99 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PTX4Q96A99 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PTX4Q96A99 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX4Q96A99 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.82■□□□□ 0.6
PTX4Q96A99 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.82■□□□□ 0.6
PTX4Q96A99 AC074183.2-201ENST00000623112 922 ntBASIC18.82■□□□□ 0.6
PTX4Q96A99 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.82■□□□□ 0.6
PTX4Q96A99 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.82■□□□□ 0.6
PTX4Q96A99 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTX4Q96A99 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.81■□□□□ 0.6
PTX4Q96A99 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.81■□□□□ 0.6
PTX4Q96A99 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.81■□□□□ 0.6
PTX4Q96A99 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.81■□□□□ 0.6
PTX4Q96A99 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTX4Q96A99 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 DUX4L18-201ENST00000553347 1267 ntBASIC18.81■□□□□ 0.6
PTX4Q96A99 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX4Q96A99 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTX4Q96A99 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.81■□□□□ 0.6
PTX4Q96A99 FAM99A-202ENST00000538190 1989 ntBASIC18.81■□□□□ 0.6
PTX4Q96A99 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTX4Q96A99 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX4Q96A99 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTX4Q96A99 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX4Q96A99 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.8■□□□□ 0.6
PTX4Q96A99 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX4Q96A99 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PTX4Q96A99 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX4Q96A99 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.8■□□□□ 0.6
PTX4Q96A99 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTX4Q96A99 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PTX4Q96A99 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX4Q96A99 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.79■□□□□ 0.6
PTX4Q96A99 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTX4Q96A99 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTX4Q96A99 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PTX4Q96A99 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.79■□□□□ 0.6
PTX4Q96A99 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTX4Q96A99 LINC01960-201ENST00000563759 1884 ntBASIC18.79■□□□□ 0.6
PTX4Q96A99 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTX4Q96A99 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.79■□□□□ 0.6
PTX4Q96A99 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTX4Q96A99 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.79■□□□□ 0.6
PTX4Q96A99 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.78■□□□□ 0.6
PTX4Q96A99 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 AC009086.3-201ENST00000623486 1008 ntBASIC18.78■□□□□ 0.6
PTX4Q96A99 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PTX4Q96A99 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTX4Q96A99 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PTX4Q96A99 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PTX4Q96A99 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.77■□□□□ 0.6
PTX4Q96A99 ATP5G2P3-201ENST00000429083 425 ntBASIC18.77■□□□□ 0.6
PTX4Q96A99 SNX5-217ENST00000606557 1087 ntBASIC18.77■□□□□ 0.6
PTX4Q96A99 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.77■□□□□ 0.6
PTX4Q96A99 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PTX4Q96A99 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTX4Q96A99 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTX4Q96A99 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTX4Q96A99 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTX4Q96A99 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTX4Q96A99 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PTX4Q96A99 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.76■□□□□ 0.59
PTX4Q96A99 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTX4Q96A99 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms