Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC131281.2-201ENST00000520478 145 ntBASIC23.8■■□□□ 1.4
LMO3Q8TAP4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LMO3Q8TAP4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.8■■□□□ 1.4
LMO3Q8TAP4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
LMO3Q8TAP4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 EP400NL-214ENST00000641289 2402 ntBASIC23.79■■□□□ 1.4
LMO3Q8TAP4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LMO3Q8TAP4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LMO3Q8TAP4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 AC079834.2-201ENST00000609776 1949 ntBASIC23.77■■□□□ 1.4
LMO3Q8TAP4 pRNA.6-201ENST00000610482 90 ntBASIC23.77■■□□□ 1.4
LMO3Q8TAP4 pRNA.5-201ENST00000612139 90 ntBASIC23.77■■□□□ 1.4
LMO3Q8TAP4 pRNA.11-201ENST00000618423 90 ntBASIC23.77■■□□□ 1.4
LMO3Q8TAP4 pRNA.13-201ENST00000619112 90 ntBASIC23.77■■□□□ 1.4
LMO3Q8TAP4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LMO3Q8TAP4 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
LMO3Q8TAP4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 SRD5A1P1-201ENST00000442297 786 ntBASIC23.76■■□□□ 1.39
LMO3Q8TAP4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 MIR3181-201ENST00000578512 73 ntBASIC23.76■■□□□ 1.39
LMO3Q8TAP4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LMO3Q8TAP4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LMO3Q8TAP4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 AC133637.1-201ENST00000624115 1537 ntBASIC23.74■■□□□ 1.39
LMO3Q8TAP4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 AC080038.3-201ENST00000623346 1952 ntBASIC23.74■■□□□ 1.39
LMO3Q8TAP4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 LINC01960-201ENST00000563759 1884 ntBASIC23.74■■□□□ 1.39
LMO3Q8TAP4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LMO3Q8TAP4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
LMO3Q8TAP4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 AC242852.2-201ENST00000615738 1807 ntBASIC23.72■■□□□ 1.39
LMO3Q8TAP4 AC139530.1-201ENST00000575312 1977 ntBASIC23.72■■□□□ 1.39
LMO3Q8TAP4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.72■■□□□ 1.39
LMO3Q8TAP4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LMO3Q8TAP4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LMO3Q8TAP4 LINC00526-201ENST00000581067 1875 ntBASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms