Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DEPDC4Q8N2C3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.42■□□□□ 0.86
DEPDC4Q8N2C3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DEPDC4Q8N2C3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 C11orf96-202ENST00000528572 1834 ntBASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DEPDC4Q8N2C3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 SLC25A24-204ENST00000569674 2357 ntBASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DEPDC4Q8N2C3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
DEPDC4Q8N2C3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 MIR4787-201ENST00000607364 84 ntBASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DEPDC4Q8N2C3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 AC137630.3-201ENST00000607245 391 ntBASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DEPDC4Q8N2C3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 AC139530.1-201ENST00000575312 1977 ntBASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 AC131274.2-201ENST00000580697 1507 ntBASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 AC079630.1-202ENST00000618127 1840 ntBASIC20.37■□□□□ 0.85
DEPDC4Q8N2C3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEPDC4Q8N2C3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms