Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CCDC25Q86WR0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC25Q86WR0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 HSD17B1P1-201ENST00000590052 955 ntBASIC22.71■■□□□ 1.23
CCDC25Q86WR0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC25Q86WR0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC25Q86WR0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CCDC25Q86WR0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC25Q86WR0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.69■■□□□ 1.22
CCDC25Q86WR0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 AC087742.1-201ENST00000575880 1738 ntBASIC22.68■■□□□ 1.22
CCDC25Q86WR0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC25Q86WR0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 KRT18P24-201ENST00000344739 1156 ntBASIC22.67■■□□□ 1.22
CCDC25Q86WR0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC25Q86WR0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC25Q86WR0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 PVT1_1.1-201ENST00000615125 194 ntBASIC22.65■■□□□ 1.22
CCDC25Q86WR0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCDC25Q86WR0 AC144652.1-201ENST00000609974 1624 ntBASIC22.64■■□□□ 1.22
CCDC25Q86WR0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC25Q86WR0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC25Q86WR0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC25Q86WR0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC25Q86WR0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC25Q86WR0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC25Q86WR0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.62■■□□□ 1.21
CCDC25Q86WR0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms